Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P31970_001 | Banana | mitochondrion | 37.72 | 12.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 37.72 | 11.17 |
| GSMUA_Achr2P18500_001 | Banana | plasma membrane | 38.92 | 7.84 |
| GSMUA_Achr3P05380_001 | Banana | cytosol | 13.17 | 5.43 |
| GSMUA_Achr6P19310_001 | Banana | endoplasmic reticulum | 8.98 | 3.88 |
| GSMUA_Achr10P... | Banana | cytosol | 1.8 | 2.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P19300_001 | EnsemblPlants:GSMUA_Achr6T19300_001 | EnsemblPlantsGene:GSMUA_Achr6G19300_001 | Gene3D:2.40.50.140 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:NA-bd_OB-fold | InterPro:NA-bd_OB_tRNA | PANTHER:PTHR22594 | PANTHER:PTHR22594:SF36 | PFAM:PF01336 |
| SEG:seg | SUPFAM:SSF50249 | UniParc:UPI00029667B2 | UniProt:M0T8C8 | MapMan:17.2.3 | : |
Description
Asparaginyl-tRNA synthetase, cytoplasmic 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G19300_001]
Coordinates
chr6:+:13566232..13566735
Molecular Weight (calculated)
18300.2 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.106
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKGVSSAG DDAALEPSRP RTFIKDIVRG ATEELVGRKV VVGGWVKTGR EQGRGSFAFL ELNDGSCLAN LQVIVDAAVH PLTQLVPTGT CVLVEGELKK
101: PPEGAKQSVE LKVESVLEVG TVDPAKYPLP KTRKGFTLEF LRDFGHLRAR TNTVLIRHFL LRELYYL
101: PPEGAKQSVE LKVESVLEVG TVDPAKYPLP KTRKGFTLEF LRDFGHLRAR TNTVLIRHFL LRELYYL
001: MGDEIVPPAN QLAADNLEND GSTVQKAQFS DRVLIRSILG GGAKLAGQKV RIGGWVKTGR QQGKGTFAFL EVNDGSCPAN LQVMVDSSLY DLSRLVATGT
101: CVTVDGVLKI PPEGKGLKQS IELSVETVIA VGTVDPTTYP LPKTKLTPEF LRDVLHLRSR TNLISAVARI RNALAFATHS FFQEHSFLYI HTPIITTSDC
201: EGAGEMFQVT TLINHTERVE QDLIDNPPPT EADVEAARLI VKERGEAVAQ LKVAKASKEE ITASVAQLSV AKASLAHVEE RLRLKPGLPK NDGKIDYSND
301: FFGRQAFLTV SGQLQVETYA CALSSVYTFG PTFRAENSHT SRHLAEFWMV EPEIAFADIH DDMNCAEAYV KYMCKWLMDK CGDDMELMDK NVDEGCTKRL
401: NMVAKASFKR VTYTEAIERL EKAVAQGKVV FDNKVEWGID LASEHERYLT EVEFDQKPII VYNYPKGIKA FYMRLNDDEK TVAAMDVLVP KVGELIGGSQ
501: REERYDVIKQ RIEEMGLPME PYEWYLDLRR YGTVKHCGFG LGFERMIQFA TGIDNIRDVI PFPRYPGKAD L
101: CVTVDGVLKI PPEGKGLKQS IELSVETVIA VGTVDPTTYP LPKTKLTPEF LRDVLHLRSR TNLISAVARI RNALAFATHS FFQEHSFLYI HTPIITTSDC
201: EGAGEMFQVT TLINHTERVE QDLIDNPPPT EADVEAARLI VKERGEAVAQ LKVAKASKEE ITASVAQLSV AKASLAHVEE RLRLKPGLPK NDGKIDYSND
301: FFGRQAFLTV SGQLQVETYA CALSSVYTFG PTFRAENSHT SRHLAEFWMV EPEIAFADIH DDMNCAEAYV KYMCKWLMDK CGDDMELMDK NVDEGCTKRL
401: NMVAKASFKR VTYTEAIERL EKAVAQGKVV FDNKVEWGID LASEHERYLT EVEFDQKPII VYNYPKGIKA FYMRLNDDEK TVAAMDVLVP KVGELIGGSQ
501: REERYDVIKQ RIEEMGLPME PYEWYLDLRR YGTVKHCGFG LGFERMIQFA TGIDNIRDVI PFPRYPGKAD L
Arabidopsis Description
SYNC3Asparagine--tRNA ligase, cytoplasmic 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.