Factsheet for GSMUA_Achr3P05380_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73541	Canola	cytosol	37.28	72.25
GSMUA_Achr10P...	Banana	cytosol	22.47	62.33
VIT_04s0008g03010.t01	Wine grape	cytosol	82.96	61.76
Solyc05g056250.2.1	Tomato	plastid	81.23	60.48
KRH15638	Soybean	nucleus	80.0	59.67
KRH05378	Soybean	nucleus	79.75	59.38
Bra007014.1-P	Field mustard	cytosol	23.46	53.98
CDX78190	Canola	cytosol	23.46	53.98
AT4G26870.1	Thale cress	cytosol	70.86	53.95
CDY35247	Canola	cytosol	70.37	53.88
AT4G31180.1	Thale cress	cytosol	73.58	53.41
CDY14727	Canola	cytosol	70.37	53.07
CDX68726	Canola	extracellular	71.6	52.82
CDY28248	Canola	cytosol	71.36	52.64
Bra011251.1-P	Field mustard	cytosol	71.36	52.64
CDY13418	Canola	cytosol	69.88	51.27
Bra024018.1-P	Field mustard	cytosol	69.88	51.27
CDX72297	Canola	cytosol	69.14	50.54
CDY06845	Canola	nucleus	51.36	41.03
GSMUA_Achr6P19310_001	Banana	endoplasmic reticulum	22.47	23.51
GSMUA_Achr8P31970_001	Banana	mitochondrion	19.01	15.16
Bra011081.1-P	Field mustard	cytosol	66.17	15.14
GSMUA_AchrUn_...	Banana	cytosol	20.49	14.72
GSMUA_Achr6P19300_001	Banana	cytosol	5.43	13.17
GSMUA_Achr2P18500_001	Banana	plasma membrane	24.69	12.06

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr3G05380_001	EnsemblPlants:GSMUA_Achr3P05380_001	EnsemblPlants:GSMUA_Achr3T05380_001	InterPro:IPR006195	UniProt:M0SC06
InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1
SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI000294ACFC	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II

Description

Aspartyl-tRNA synthetase, cytoplasmic [Source:GMGC_GENE;Acc:GSMUA_Achr3G05380_001]

Coordinates

chr3:+:3552556..3562121

Molecular Weight (calculated)

46067.5 Da

IEP (calculated)

5.925

GRAVY (calculated)

-0.217

Length

405 amino acids

Sequence
(BLAST)

001: MVKFATGLSK ESIVDVEGMI SIPKDPIKGT TQQVEVQVRK LYCINRSVPN LPINIEDAAR SETEFEKAEL TGEQLVRVGQ DTRLNYRVLD LRTPANQAIF
101: RIQCHVEDVF RRFLRSEGFI GIHSPKLISG SSEGGAAVFK LDYKGQPACL AQSPQLYKQM VICGGFGRVF EVGSVFRAED SYTHRHLCEF VGLDVEMEIK
201: EHYFEVCDIV DRLFVAMFDD LNENCKKELD AINRQYPFEP LKYLRKTLRL NFQEGIKMLQ EAGVEVDPLG DLNTEAEKKL GRLVHEKYDT DFYILCRYPL
301: AVRPFYTMPC YDDPAYSNSF DVFIRGEEII SGAQRVHLPE LLTTRAEACG IDVKTIASYI DSFRYGAPPH GGFGIGLERV VMLFCALNNI RKTSLFPRDP
401: QRLVP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.