Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35247 | Canola | cytosol | 88.91 | 89.41 |
| CDY14727 | Canola | cytosol | 87.97 | 87.15 |
| CDY06845 | Canola | nucleus | 70.86 | 74.36 |
| AT4G31180.1 | Thale cress | cytosol | 76.88 | 73.3 |
| GSMUA_Achr3P05380_001 | Banana | cytosol | 53.95 | 70.86 |
| Solyc05g056250.2.1 | Tomato | plastid | 66.73 | 65.26 |
| KRH05378 | Soybean | nucleus | 65.6 | 64.15 |
| KRH15638 | Soybean | nucleus | 65.23 | 63.9 |
| VIT_04s0008g03010.t01 | Wine grape | cytosol | 65.04 | 63.6 |
| Os02t0686400-01 | Rice | extracellular | 61.84 | 59.93 |
| Zm00001d008975_P002 | Maize | cytosol | 60.71 | 59.27 |
| TraesCS5D01G165200.1 | Wheat | cytosol, golgi | 60.34 | 59.01 |
| Zm00001d015168_P001 | Maize | extracellular, plasma membrane | 60.34 | 58.79 |
| KXG31524 | Sorghum | cytosol | 60.34 | 58.68 |
| HORVU5Hr1G050160.1 | Barley | cytosol | 59.96 | 58.64 |
| TraesCS5A01G160100.2 | Wheat | cytosol | 60.15 | 58.61 |
| TraesCS5B01G157800.1 | Wheat | cytosol | 60.15 | 58.39 |
| OQU84347 | Sorghum | cytosol | 54.14 | 57.95 |
| HORVU7Hr1G107410.1 | Barley | cytosol | 56.2 | 55.47 |
| Os02t0139600-01 | Rice | cytosol | 35.9 | 54.11 |
| TraesCS5D01G333800.2 | Wheat | cytosol | 55.83 | 53.42 |
| HORVU5Hr1G083090.1 | Barley | cytosol, plastid | 54.51 | 52.92 |
| TraesCS5B01G327800.1 | Wheat | cytosol, plastid | 54.51 | 52.73 |
| TraesCS5A01G327900.1 | Wheat | cytosol | 54.32 | 52.26 |
| TraesCS7B01G222700.1 | Wheat | cytosol | 29.7 | 50.32 |
| GSMUA_Achr10P... | Banana | cytosol | 12.97 | 47.26 |
| HORVU6Hr1G022660.15 | Barley | cytosol | 32.33 | 43.0 |
| HORVU7Hr1G011750.7 | Barley | cytosol, mitochondrion, nucleus | 31.77 | 42.68 |
| TraesCS1A01G111100.1 | Wheat | cytosol | 41.35 | 41.43 |
| HORVU4Hr1G090760.1 | Barley | cytosol | 30.83 | 40.69 |
| HORVU1Hr1G024420.4 | Barley | mitochondrion | 32.14 | 39.22 |
| AT1G68420.1 | Thale cress | cytosol | 4.51 | 27.59 |
| Bra011081.1-P | Field mustard | cytosol | 83.83 | 25.2 |
| AT5G56680.1 | Thale cress | cytosol | 22.37 | 20.8 |
| AT1G70980.1 | Thale cress | cytosol | 21.43 | 19.96 |
| AT4G17300.2 | Thale cress | cytosol, plastid | 21.05 | 19.08 |
| AT3G07420.1 | Thale cress | cytosol | 18.42 | 15.36 |
Protein Annotations
| MapMan:17.2.4 | Gene3D:2.40.50.140 | Gene3D:3.30.930.10 | EntrezGene:828794 | ProteinID:AEE85263.1 | ArrayExpress:AT4G26870 |
| EnsemblPlantsGene:AT4G26870 | RefSeq:AT4G26870 | TAIR:AT4G26870 | RefSeq:AT4G26870-TAIR-G | EnsemblPlants:AT4G26870.1 | TAIR:AT4G26870.1 |
| InterPro:Asp-tRNA_synthase_2 | InterPro:Asp/Asn-tRNA-synth_IIb | Unigene:At.27451 | EMBL:BT000939 | ProteinID:CAB36533.1 | ProteinID:CAB79542.1 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0004812 | GO:GO:0004815 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006412 | GO:GO:0006418 |
| GO:GO:0006422 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 |
| GO:GO:0016874 | GO:GO:0019538 | GO:GO:0046686 | GO:GO:0046872 | InterPro:IPR006195 | HAMAP:MF_02075 |
| InterPro:NA-bd_OB-fold | InterPro:NA-bd_OB_tRNA | RefSeq:NP_194417.2 | PFAM:PF00152 | PFAM:PF01336 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR01042 | PFscan:PS50862 | PANTHER:PTHR43450 | PANTHER:PTHR43450:SF1 | UniProt:Q8H104 | SUPFAM:SSF50249 |
| SUPFAM:SSF55681 | TIGRFAMs:TIGR00458 | UniParc:UPI00000ADB1B | InterPro:aa-tRNA-synt_II | InterPro:aa-tRNA-synth_II | SEG:seg |
Description
Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
Coordinates
chr4:+:13505291..13507870
Molecular Weight (calculated)
60336.6 Da
IEP (calculated)
6.591
GRAVY (calculated)
-0.383
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.