CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0139600-01	Rice	cytosol	51.11	71.95
CDX73541	Canola	cytosol	27.77	66.03
VIT_04s0008g03010.t01	Wine grape	cytosol	64.19	58.64
KRH15638	Soybean	nucleus	63.98	58.56
Solyc05g056250.2.1	Tomato	plastid	63.18	57.72
KRH05378	Soybean	nucleus	62.78	57.35
KXG31524	Sorghum	cytosol	61.57	55.94
AT4G26870.1	Thale cress	cytosol	57.95	54.14
CDY35247	Canola	cytosol	57.55	54.06
CDX68726	Canola	extracellular	58.75	53.19
CDY28248	Canola	cytosol	58.55	53.01
Bra011251.1-P	Field mustard	cytosol	58.55	53.01
CDY14727	Canola	cytosol	56.94	52.7
CDY13418	Canola	cytosol	57.14	51.45
Bra024018.1-P	Field mustard	cytosol	57.14	51.45
CDX78190	Canola	cytosol	18.11	51.14
Bra007014.1-P	Field mustard	cytosol	18.11	51.14
AT4G31180.1	Thale cress	cytosol	56.94	50.72
CDX72297	Canola	cytosol	56.34	50.54
TraesCS1A01G111100.1	Wheat	cytosol	44.47	41.62
CDY06845	Canola	nucleus	42.45	41.62
HORVU1Hr1G024420.4	Barley	mitochondrion	34.21	38.99
EER90985	Sorghum	cytosol	23.74	21.03
EER95098	Sorghum	cytosol	23.74	21.03
KXG36232	Sorghum	mitochondrion	21.73	19.57
Bra011081.1-P	Field mustard	cytosol	54.12	15.2

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A1Z5RKZ5	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	EnsemblPlants:OQU84347
ProteinID:OQU84347	ProteinID:OQU84347.1	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450
PANTHER:PTHR43450:SF1	EnsemblPlantsGene:SORBI_3004G037000	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI000B8B9B01
InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:2968605..2970559

Molecular Weight (calculated)

54256.8 Da

IEP (calculated)

6.860

GRAVY (calculated)

-0.150

Length

497 amino acids

Sequence
(BLAST)

001: MASSGGEHHE EAEDSYGDAA TIGALRQLYA GYAWADVASL GPESSGRAVR VRGAAQAVRA VGRRVAFLVL RQGTATVQCV VAGDGGGGMA MARFAAGLSR
101: DRWWTSPAPC RCRGTPSAAP PSQQLVEIKV EKLHCVSRAV PALPIGVDDA ARSEEDVARA KAAGEQVVHV GQDKRLDYRV IDLRTAANQA IFRVQCQVEN
201: VFRQVLLSEG FVGIHTPKLI GGSSEGGAAV FKLDYNGQAA CLAQSPQLHK QMAVCGGFGR VFEVGPVFRA EDSDTHRHLC EFVGLDVEMA LRDHYTEVCD
301: VVDRLFVAMF DHLNDKCGKE LEAIHRQYPF QPLKYLRTTL RMDYDEGIRM LQEAGVHVDA MGDLNTEAEK KLGDLVRDRY GTEFYMLCRY PSAVRPFYTM
401: PCPEDPRYSC SFDVFVRGEE IISGAQRVHV PDLLAAQAAA RGIDVASIAT YVDAFRYGAP PHGGFGVGLE RVVMLFCGLG NIRKTSLFPR DPRRLAP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.