Factsheet for Bra024018.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13418	Canola	cytosol	100.0	100.0
Bra011251.1-P	Field mustard	cytosol	85.14	85.61
Bra007014.1-P	Field mustard	cytosol	24.82	77.84
GSMUA_Achr3P05380_001	Banana	cytosol	51.27	69.88
KRH15638	Soybean	nucleus	65.04	66.11
KRH05378	Soybean	nucleus	65.04	65.99
Solyc05g056250.2.1	Tomato	plastid	64.49	65.44
VIT_04s0008g03010.t01	Wine grape	cytosol	63.59	64.52
HORVU5Hr1G050160.1	Barley	cytosol	60.51	61.4
TraesCS5D01G165200.1	Wheat	cytosol, golgi	60.51	61.4
TraesCS5A01G160100.2	Wheat	cytosol	60.69	61.36
TraesCS5B01G157800.1	Wheat	cytosol	60.51	60.95
Os02t0686400-01	Rice	extracellular	60.51	60.84
Zm00001d008975_P002	Maize	cytosol	58.88	59.63
KXG31524	Sorghum	cytosol	59.06	59.6
Zm00001d015168_P001	Maize	extracellular, plasma membrane	58.33	58.97
HORVU7Hr1G107410.1	Barley	cytosol	56.52	57.88
OQU84347	Sorghum	cytosol	51.45	57.14
TraesCS5D01G333800.2	Wheat	cytosol	54.89	54.5
TraesCS5A01G327900.1	Wheat	cytosol	54.17	54.07
TraesCS5B01G327800.1	Wheat	cytosol, plastid	53.62	53.82
Os02t0139600-01	Rice	cytosol	34.06	53.26
HORVU5Hr1G083090.1	Barley	cytosol, plastid	52.17	52.55
TraesCS7B01G222700.1	Wheat	cytosol	28.08	49.36
GSMUA_Achr10P...	Banana	cytosol	13.04	49.32
HORVU6Hr1G022660.15	Barley	cytosol	33.7	46.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	32.43	45.2
HORVU4Hr1G090760.1	Barley	cytosol	31.52	43.18
TraesCS1A01G111100.1	Wheat	cytosol	39.67	41.24
HORVU1Hr1G024420.4	Barley	mitochondrion	30.43	38.53
Bra006861.1-P	Field mustard	cytosol	22.46	22.34
Bra002799.1-P	Field mustard	cytosol	22.46	21.57
Bra021059.1-P	Field mustard	plastid	21.38	21.0
Bra026243.1-P	Field mustard	plastid	21.01	20.6
Bra011081.1-P	Field mustard	cytosol	65.22	20.34
Bra002754.1-P	Field mustard	cytosol	18.66	17.25
Bra001250.1-P	Field mustard	cytosol	19.2	17.01
Bra029647.1-P	Field mustard	cytosol	18.66	16.25

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	EnsemblPlantsGene:Bra024018
EnsemblPlants:Bra024018.1	EnsemblPlants:Bra024018.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR006195	UniProt:M4E5G4	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	InterPro:NA-bd_OB_tRNA	PFAM:PF00152
PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681
TIGRFAMs:TIGR00458	UniParc:UPI0002540F09	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:

Description

AT4G31180 (E=2e-219) | aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative

Coordinates

chrA03:+:28192918..28195366

Molecular Weight (calculated)

62460.7 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.422

Length

552 amino acids

Sequence
(BLAST)

001: MSSEPENPSS STATPPEESG EKISKKAAKK EAAKLEKLRR RQEKEEEEAS RKTASLSIEE ESFSRNYGDV TLNELKSTED PKAGKWREAV EGKEWTDVRE
101: LVEAMAGTEV LIRGRVHTYR HVSSKKGFLI VRQKWSRVQC VVTESKENHV SVNMVKFVKQ LNSESFVDVI GYVVLPKDPV TGATQQVEIQ VRKVYCVNSA
201: LQQLPLYVED AARSEADIQA GKPGANQDTR LNLRVIDLRT AANQGIFSIQ GWTQIGWREC LLRKGFIEIH SPKLLAGSSE GGSAVFRLDY KGQPACLAQS
301: PQLHKQMAIC ADFERVFEVG AVYRAEDSFT HRHLCEFIGL DVEMAIHKHY SEIMDLVGEL FPFIFNKINE NCQKELEAIR KQYPFQPLKF LPKTLRLTFA
401: EGIQMLKEAG VEADPLGDLN TETERKLGLL VLEKYNTEFY ILHRYPSAVR PFYTMPCADD PNYSNSFDVF IRGEEIISGA QRVHDPELLT EQAKRFGIDV
501: ETIKTYIDSF RYGAPPHGGF GVGLERVVML FCGLNNIRKT SLFPRDPLRL AP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.