Factsheet for TraesCS5A01G160100.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G165200.1	Wheat	cytosol, golgi	98.9	99.26
HORVU5Hr1G050160.1	Barley	cytosol	98.35	98.71
TraesCS5B01G157800.1	Wheat	cytosol	98.72	98.36
Os02t0686400-01	Rice	extracellular	90.66	90.16
KXG31524	Sorghum	cytosol	87.73	87.57
Zm00001d008975_P002	Maize	cytosol	87.18	87.34
Zm00001d015168_P001	Maize	extracellular, plasma membrane	87.18	87.18
CDX73541	Canola	cytosol	26.56	69.38
TraesCS5A01G327900.1	Wheat	cytosol	69.6	68.72
KRH15638	Soybean	nucleus	67.95	68.32
VIT_04s0008g03010.t01	Wine grape	cytosol	67.95	68.2
KRH05378	Soybean	nucleus	67.95	68.2
Solyc05g056250.2.1	Tomato	plastid	67.22	67.46
CDY28248	Canola	cytosol	64.65	64.3
CDX68726	Canola	extracellular	64.65	64.3
Bra011251.1-P	Field mustard	cytosol	64.47	64.12
AT4G31180.1	Thale cress	cytosol	64.84	63.44
CDY35247	Canola	cytosol	59.16	61.06
CDX78190	Canola	cytosol	19.6	60.8
Bra007014.1-P	Field mustard	cytosol	19.6	60.8
Bra024018.1-P	Field mustard	cytosol	61.36	60.69
CDY13418	Canola	cytosol	61.36	60.69
AT4G26870.1	Thale cress	cytosol	58.61	60.15
CDX72297	Canola	cytosol	60.81	59.93
CDY14727	Canola	cytosol	58.61	59.59
GSMUA_Achr10P...	Banana	cytosol	14.1	52.74
CDY06845	Canola	nucleus	45.6	49.11
TraesCS1A01G111100.1	Wheat	cytosol	46.15	47.46
TraesCS2A01G231500.2	Wheat	cytosol	19.05	24.53
TraesCS7A01G031700.1	Wheat	cytosol	20.33	21.68
TraesCS1A01G102600.1	Wheat	golgi	20.88	20.14
TraesCS2A01G584300.1	Wheat	cytosol	20.33	19.96
Bra011081.1-P	Field mustard	cytosol	56.23	17.34

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152
PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF50249	SUPFAM:SSF55681
TIGRFAMs:TIGR00458	EnsemblPlantsGene:TraesCS5A01G160100	EnsemblPlants:TraesCS5A01G160100.2	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	TIGR:cd00776
TIGR:cd04320	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:341658766..341668920

Molecular Weight (calculated)

60917.0 Da

IEP (calculated)

6.275

GRAVY (calculated)

-0.305

Length

546 amino acids

Sequence
(BLAST)

001: MSSEPAPAPA SASTEELEAD LSAATISKKQ LKKDARKAEK AGKASQRQQQ QQPHAEEADP FAANYGDVPV EEIQSKAISG RSWTDIGDLD EAAAGRSVLI
101: RGSAQTLRPV SKKMAFVVLR QSMSTVQCVL VASADAGVST QMVRFATSLS KESIVDVEGV VTLPKEPLKA TTQQVEIQVR KVYCINRAIP TLPINLEDAA
201: RSEAEFEKAE QNGEKLVRVL QDTRLNYRAI DLRTPANQAI FRIQCHVENK FREFLFLENF IGIHSPKLIG GSSEGGASVF KLEYNGQPAC LAQSPQLYKQ
301: MSICGGFGRV FEVGPVFRAE KSNTHRHLCE FIGLDAEMEI KEHYFEVCDI IDGLFVAIFK HLNENCQKEL ETINRQYPFE PLKYLEKTLK LTYEEGIKML
401: KEAGTEIEPM GDLNTEAEKK LGRLVKEKYG TEFFILYRYP LAVRPFYTMP CYDDPAYSNS FDVFIRGEEI ISGAQRIHTP ELLRKRAIEC GIDASTIASY
501: IESFSYGAPP HGGFGVGLER VVMLFCALNN IRKTSLFPRD PQRLAP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.