CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024018.1-P	Field mustard	cytosol	100.0	100.0
CDX72297	Canola	cytosol	96.38	96.03
CDX68726	Canola	extracellular	85.69	86.16
CDY28248	Canola	cytosol	85.14	85.61
CDX78190	Canola	cytosol	24.82	77.84
CDX73541	Canola	cytosol	28.44	75.12
CDY35247	Canola	cytosol	69.57	72.59
CDY14727	Canola	cytosol	69.02	70.95
GSMUA_Achr3P05380_001	Banana	cytosol	51.27	69.88
KRH15638	Soybean	nucleus	65.04	66.11
KRH05378	Soybean	nucleus	65.04	65.99
Solyc05g056250.2.1	Tomato	plastid	64.49	65.44
VIT_04s0008g03010.t01	Wine grape	cytosol	63.59	64.52
TraesCS5D01G165200.1	Wheat	cytosol, golgi	60.51	61.4
HORVU5Hr1G050160.1	Barley	cytosol	60.51	61.4
TraesCS5A01G160100.2	Wheat	cytosol	60.69	61.36
TraesCS5B01G157800.1	Wheat	cytosol	60.51	60.95
Os02t0686400-01	Rice	extracellular	60.51	60.84
CDY06845	Canola	nucleus	55.43	60.35
Zm00001d008975_P002	Maize	cytosol	58.88	59.63
KXG31524	Sorghum	cytosol	59.06	59.6
Zm00001d015168_P001	Maize	extracellular, plasma membrane	58.33	58.97
HORVU7Hr1G107410.1	Barley	cytosol	56.52	57.88
OQU84347	Sorghum	cytosol	51.45	57.14
TraesCS5D01G333800.2	Wheat	cytosol	54.89	54.5
TraesCS5A01G327900.1	Wheat	cytosol	54.17	54.07
TraesCS5B01G327800.1	Wheat	cytosol, plastid	53.62	53.82
Os02t0139600-01	Rice	cytosol	34.06	53.26
HORVU5Hr1G083090.1	Barley	cytosol, plastid	52.17	52.55
TraesCS7B01G222700.1	Wheat	cytosol	28.08	49.36
GSMUA_Achr10P...	Banana	cytosol	13.04	49.32
HORVU6Hr1G022660.15	Barley	cytosol	33.7	46.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	32.43	45.2
HORVU4Hr1G090760.1	Barley	cytosol	31.52	43.18
TraesCS1A01G111100.1	Wheat	cytosol	39.67	41.24
HORVU1Hr1G024420.4	Barley	mitochondrion	30.43	38.53
CDY08000	Canola	cytosol	7.25	25.81
CDX88584	Canola	cytosol	21.2	22.12
CDY11908	Canola	plastid	22.64	21.74
CDY32766	Canola	cytosol	22.46	21.57
CDY32876	Canola	cytosol, extracellular	22.28	21.39
CDY50134	Canola	plastid	21.38	21.0
CDY42212	Canola	cytosol	21.56	20.95
CDY35583	Canola	plastid	21.2	20.89
CDY58174	Canola	plastid	21.2	20.82
CDY53991	Canola	cytosol	20.29	20.82
CDY42978	Canola	plastid	21.01	20.6
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	17.57	19.44
CDY38272	Canola	cytosol	15.04	17.44
CDX74047	Canola	cytosol	18.84	16.69
CDY28051	Canola	cytosol	19.02	16.59
CDY35930	Canola	cytosol	19.02	16.56
CDY07998	Canola	cytosol	18.3	16.4

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	GO:A0A078FM60	UniProt:A0A078FM60	InterPro:Asp-tRNA_synthase_2
InterPro:Asp/Asn-tRNA-synth_IIb	EnsemblPlants:CDY13418	ProteinID:CDY13418	ProteinID:CDY13418.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00077697001	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold
InterPro:NA-bd_OB_tRNA	PFAM:PF00152	PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450
SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI0002540F09	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II
SEG:seg	:	:	:	:	:

Description

BnaA03g51360DBnaA03g51360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FM60]

Coordinates

chrLK032035:+:176939..179609

Molecular Weight (calculated)

62460.7 Da

IEP (calculated)

6.792

GRAVY (calculated)

-0.422

Length

552 amino acids

Sequence
(BLAST)

001: MSSEPENPSS STATPPEESG EKISKKAAKK EAAKLEKLRR RQEKEEEEAS RKTASLSIEE ESFSRNYGDV TLNELKSTED PKAGKWREAV EGKEWTDVRE
101: LVEAMAGTEV LIRGRVHTYR HVSSKKGFLI VRQKWSRVQC VVTESKENHV SVNMVKFVKQ LNSESFVDVI GYVVLPKDPV TGATQQVEIQ VRKVYCVNSA
201: LQQLPLYVED AARSEADIQA GKPGANQDTR LNLRVIDLRT AANQGIFSIQ GWTQIGWREC LLRKGFIEIH SPKLLAGSSE GGSAVFRLDY KGQPACLAQS
301: PQLHKQMAIC ADFERVFEVG AVYRAEDSFT HRHLCEFIGL DVEMAIHKHY SEIMDLVGEL FPFIFNKINE NCQKELEAIR KQYPFQPLKF LPKTLRLTFA
401: EGIQMLKEAG VEADPLGDLN TETERKLGLL VLEKYNTEFY ILHRYPSAVR PFYTMPCADD PNYSNSFDVF IRGEEIISGA QRVHDPELLT EQAKRFGIDV
501: ETIKTYIDSF RYGAPPHGGF GVGLERVVML FCGLNNIRKT SLFPRDPLRL AP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.