Factsheet for TraesCS7B01G222700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G157800.1	Wheat	cytosol	76.75	43.98
KRH15638	Soybean	nucleus	58.92	34.07
KRH05378	Soybean	nucleus	58.92	34.01
TraesCS5B01G327800.1	Wheat	cytosol, plastid	59.24	33.82
VIT_04s0008g03010.t01	Wine grape	cytosol	57.01	32.9
Solyc05g056250.2.1	Tomato	plastid	55.1	31.8
CDX68726	Canola	extracellular	54.78	31.33
Bra011251.1-P	Field mustard	cytosol	54.14	30.97
CDY28248	Canola	cytosol	54.14	30.97
CDY06845	Canola	nucleus	49.36	30.57
AT4G31180.1	Thale cress	cytosol	54.14	30.47
AT4G26870.1	Thale cress	cytosol	50.32	29.7
CDY35247	Canola	cytosol	48.73	28.92
CDY13418	Canola	cytosol	49.36	28.08
Bra024018.1-P	Field mustard	cytosol	49.36	28.08
CDX72297	Canola	cytosol	49.36	27.98
CDY14727	Canola	cytosol	46.82	27.37
CDX78190	Canola	cytosol	5.73	10.23
Bra007014.1-P	Field mustard	cytosol	5.73	10.23
TraesCS2B01G255900.2	Wheat	mitochondrion	16.88	9.89
TraesCS1B01G113400.1	Wheat	cytosol	16.24	9.01
Bra011081.1-P	Field mustard	cytosol	49.36	8.76
CDX73541	Canola	cytosol	3.18	4.78
GSMUA_Achr10P...	Banana	cytosol	0.32	0.68

Protein Annotations

Gene3D:2.40.50.140	Gene3D:3.30.930.10	MapMan:50.6.1	InterPro:Asp-tRNA_synthase_2	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:NA-bd_OB-fold	PFAM:PF00152	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681
EnsemblPlantsGene:TraesCS7B01G222700	EnsemblPlants:TraesCS7B01G222700.1	InterPro:aa-tRNA-synt_II	TIGR:cd04320	SEG:seg	:

Description

No Description!

Coordinates

chr7B:+:418193628..418203372

Molecular Weight (calculated)

34351.0 Da

IEP (calculated)

7.250

GRAVY (calculated)

-0.219

Length

314 amino acids

Sequence
(BLAST)

001: MSSEPLPAST EALEADLSAA TISKKQLNKE ARKAAKAAKA ENAGKAEKSQ AEEEDDPFAV NYGDVPLEEI QSKVISGRSW TDIGDLDEAA VGRSVLIRGY
101: AEKFRPVCKK IAFVVLRQSM TTVQCVLVAS ADTGVSTQMV RFATSLSKES IVDVEGVVSL PKDPLKATTQ QVEIQVRKVY CISRAIPTLP INLEDAARSE
201: AEFDLAERTG EKLARVHQES RLNYRVIDLR TPTSQSVFRI KFEVENAFRQ YLSSKGFIGI HTPRLISGSS EGGAAVFKLQ YYGQDACLAQ SPQLYKQMSL
301: CGGFGRVFEV GPIF

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.