CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14727	Canola	cytosol	92.44	91.06
AT4G26870.1	Thale cress	cytosol	89.41	88.91
CDY06845	Canola	nucleus	75.8	79.09
CDX73541	Canola	cytosol	30.43	77.03
CDX68726	Canola	extracellular	76.18	73.41
CDY28248	Canola	cytosol	75.99	73.22
GSMUA_Achr3P05380_001	Banana	cytosol	53.88	70.37
CDY13418	Canola	cytosol	72.59	69.57
CDX72297	Canola	cytosol	71.64	68.41
CDX78190	Canola	cytosol	22.5	67.61
Solyc05g056250.2.1	Tomato	plastid	65.22	63.42
KRH15638	Soybean	nucleus	63.89	62.25
VIT_04s0008g03010.t01	Wine grape	cytosol	63.89	62.13
KRH05378	Soybean	nucleus	63.89	62.13
Zm00001d008975_P002	Maize	cytosol	61.25	59.45
Os02t0686400-01	Rice	extracellular	61.63	59.38
TraesCS5D01G165200.1	Wheat	cytosol, golgi	61.06	59.38
KXG31524	Sorghum	cytosol	61.25	59.23
HORVU5Hr1G050160.1	Barley	cytosol	60.87	59.19
TraesCS5A01G160100.2	Wheat	cytosol	61.06	59.16
Zm00001d015168_P001	Maize	extracellular, plasma membrane	61.06	59.16
TraesCS5B01G157800.1	Wheat	cytosol	61.06	58.94
OQU84347	Sorghum	cytosol	54.06	57.55
HORVU7Hr1G107410.1	Barley	cytosol	56.9	55.84
Os02t0139600-01	Rice	cytosol	35.54	53.26
TraesCS5D01G333800.2	Wheat	cytosol	55.77	53.06
HORVU5Hr1G083090.1	Barley	cytosol, plastid	54.25	52.37
TraesCS5B01G327800.1	Wheat	cytosol, plastid	54.25	52.18
TraesCS5A01G327900.1	Wheat	cytosol	54.06	51.72
TraesCS7B01G222700.1	Wheat	cytosol	28.92	48.73
GSMUA_Achr10P...	Banana	cytosol	12.85	46.58
HORVU6Hr1G022660.15	Barley	cytosol	33.65	44.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	33.08	44.19
TraesCS1A01G111100.1	Wheat	cytosol	42.91	42.75
HORVU4Hr1G090760.1	Barley	cytosol	32.51	42.68
HORVU1Hr1G024420.4	Barley	mitochondrion	32.7	39.68
Bra011081.1-P	Field mustard	cytosol	93.38	27.91
CDY08000	Canola	cytosol	6.81	23.23
CDX88584	Canola	cytosol	21.74	21.74
CDY32876	Canola	cytosol, extracellular	23.25	21.39
CDY53991	Canola	cytosol	21.74	21.38
CDY11908	Canola	plastid	23.06	21.22
CDY32766	Canola	cytosol	23.06	21.22
CDY42212	Canola	cytosol	22.68	21.13
CDY50134	Canola	plastid	21.74	20.46
CDY35583	Canola	plastid	21.55	20.36
CDY58174	Canola	plastid	21.55	20.28
CDY42978	Canola	plastid	21.36	20.07
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	17.96	19.04
CDY38272	Canola	cytosol	15.88	17.65
CDY07998	Canola	cytosol	19.28	16.56
CDX74047	Canola	cytosol	19.28	16.37
CDY28051	Canola	cytosol	19.47	16.27
CDY35930	Canola	cytosol	19.47	16.25

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	GO:A0A078HBV1	UniProt:A0A078HBV1	InterPro:Asp-tRNA_synthase_2
InterPro:Asp/Asn-tRNA-synth_IIb	EnsemblPlants:CDY35247	ProteinID:CDY35247	ProteinID:CDY35247.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00058164001	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold
InterPro:NA-bd_OB_tRNA	PFAM:PF00152	PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450
SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI0004EED0B0	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II
SEG:seg	:	:	:	:	:

Description

BnaA01g07840DBnaA01g07840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBV1]

Coordinates

chrLK032348:+:330177..332529

Molecular Weight (calculated)

59689.8 Da

IEP (calculated)

6.876

GRAVY (calculated)

-0.346

Length

529 amino acids

Sequence
(BLAST)

001: MSSSNEEKMS KKAAKKRAAK LEKLSRKHER EEATSSSSSL PLEEEDESFS SNYGDVTPKS AAEAVEGKEL TDVSNLVEEI VGSEVSIRGR VHNHRLVGKK
101: LFVILRQSVS SVQCVVEEAR VGTSMFKFVR QLSHESVVEL IGVVSLPKKP LTGTTQQVEI HVTKMYCLSR SSLNLPLVVE DAARSEADIE KSVKDGKPAA
201: RVLQDTRLNN RPLDLRTPAN QATFRIQCHV QIAFREFLLS KGFLEIHTPK LIAGSSEGGS AVFRLDYKGQ PACLAQSPQL HKQMAICGDM RRVFEVGPVF
301: RAEDSFTHRH LCEFVGLDVE MEIRMHYSEI MDLVGDLFPF IFTKIEERCP KELESVRKQY PFQSLKFLPQ TLRLTFAEGI QMLKEAGEEV DPLGDLNTES
401: ERKLGQLVLE KYKTEFYMLH RYPSAVRPFY TMPCEDDSNY SNSFDVFIRG EEIMSGAQRI HDPELLEKRA RECGIDVMTI STYIDAFRYG APPHGGFGVG
501: LERVVMLLCA LDNIRKTSLF PRDPKRLAP

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.