Factsheet for HORVU1Hr1G024420.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G111100.1	Wheat	cytosol	66.74	54.8
CDX73541	Canola	cytosol	24.77	51.67
Bra007014.1-P	Field mustard	cytosol	15.14	37.5
CDX78190	Canola	cytosol	15.14	37.5
OQU84347	Sorghum	cytosol	38.99	34.21
HORVU7Hr1G107410.1	Barley	cytosol	41.51	33.58
VIT_04s0008g03010.t01	Wine grape	cytosol	41.74	33.46
HORVU5Hr1G050160.1	Barley	cytosol	41.74	33.46
HORVU5Hr1G083090.1	Barley	cytosol, plastid	41.97	33.39
KRH15638	Soybean	nucleus	40.83	32.78
KRH05378	Soybean	nucleus	40.83	32.72
CDY35247	Canola	cytosol	39.68	32.7
CDY14727	Canola	cytosol	40.14	32.59
AT4G26870.1	Thale cress	cytosol	39.22	32.14
Solyc05g056250.2.1	Tomato	plastid	39.91	31.99
CDY28248	Canola	cytosol	39.22	31.15
CDX68726	Canola	extracellular	39.22	31.15
Bra011251.1-P	Field mustard	cytosol	39.22	31.15
CDY13418	Canola	cytosol	38.53	30.43
Bra024018.1-P	Field mustard	cytosol	38.53	30.43
CDX72297	Canola	cytosol	38.07	29.96
AT4G31180.1	Thale cress	cytosol	38.3	29.93
Os02t0139600-01	Rice	cytosol	21.56	26.63
HORVU6Hr1G022660.15	Barley	cytosol	22.48	24.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	22.02	24.24
HORVU4Hr1G090760.1	Barley	cytosol	21.33	23.08
CDY06845	Canola	nucleus	26.61	22.88
HORVU2Hr1G049240.1	Barley	mitochondrion	17.66	14.39
HORVU1Hr1G021130.2	Barley	plastid	18.58	14.31
Bra011081.1-P	Field mustard	cytosol	36.01	8.87

Protein Annotations

MapMan:17.2.4	Gene3D:3.30.930.10	UniProt:A0A287EY10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G024420	EnsemblPlants:HORVU1Hr1G024420.4	InterPro:IPR006195
PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF55681	TMHMM:TMhelix
UniParc:UPI000B468CF6	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:111584958..111587589

Molecular Weight (calculated)

48946.3 Da

IEP (calculated)

9.202

GRAVY (calculated)

-0.167

Length

436 amino acids

Sequence
(BLAST)

001: RVHGRKKKPT PFVRPFLPPS ISLALLSVSP ASGGSQGRRH PGSHPNHGKI RFPQVDGASP VLGYLAATSL PRRAPARSYA NPSPQAPMYL GALTSSSPHQ
101: PLVTAAHYFM QFMIKGGFMC THTPKITGVS EGGSAVFKVN YFKEHTASLA QSPQLYKQML INGGINRVFE IGPVFRAEDS NTHRHLCEYI GLHAEMQIKE
201: HYFEVIDFVD SLFVDIFDHL AKNCSEMLDM IQEQYPCERL KVNLNFIFII FVLVVCACQF TVLNCVLSSQ YLQQNVRLKY SEGIEMLQES GFPIQEPQDL
301: NNKAELMLGK LVLQKYKTDF FILYEYPLAL RPFYTMPSAE KRQPGSYSNS FDAFIRGQEV LSGSQRIHDK SLLIKMIDER GYNKTTFQQF SNTFGCGAPP
401: RGGFGVGLER LVMLYLGVPD FRIASLFPRD PGRLAP

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.