Factsheet for HORVU6Hr1G022660.15

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	80.5	81.31
HORVU4Hr1G090760.1	Barley	cytosol	81.0	80.4
HORVU7Hr1G107410.1	Barley	cytosol	81.5	60.48
HORVU5Hr1G050160.1	Barley	cytosol	68.0	50.0
KXG31524	Sorghum	cytosol	65.75	48.08
Os02t0686400-01	Rice	extracellular	65.5	47.72
Zm00001d008975_P002	Maize	cytosol	64.25	47.16
Zm00001d015168_P001	Maize	extracellular, plasma membrane	64.25	47.07
Solyc05g056250.2.1	Tomato	plastid	53.25	39.15
KRH15638	Soybean	nucleus	52.75	38.86
KRH05378	Soybean	nucleus	52.75	38.79
HORVU5Hr1G083090.1	Barley	cytosol, plastid	52.0	37.96
VIT_04s0008g03010.t01	Wine grape	cytosol	51.5	37.87
GSMUA_Achr10P...	Banana	cytosol	13.75	37.67
CDX68726	Canola	extracellular	49.5	36.07
Bra011251.1-P	Field mustard	cytosol	49.25	35.88
CDY28248	Canola	cytosol	49.25	35.88
AT4G31180.1	Thale cress	cytosol	50.0	35.84
CDY06845	Canola	nucleus	44.5	35.11
CDY13418	Canola	cytosol	46.5	33.7
Bra024018.1-P	Field mustard	cytosol	46.5	33.7
CDY35247	Canola	cytosol	44.5	33.65
CDX72297	Canola	cytosol	46.5	33.57
AT4G26870.1	Thale cress	cytosol	43.0	32.33
CDY14727	Canola	cytosol	43.0	32.03
CDX73541	Canola	cytosol	13.25	25.36
HORVU1Hr1G024420.4	Barley	mitochondrion	24.5	22.48
CDX78190	Canola	cytosol	9.5	21.59
Bra007014.1-P	Field mustard	cytosol	9.5	21.59
HORVU2Hr1G049240.1	Barley	mitochondrion	16.25	12.15
HORVU1Hr1G021130.2	Barley	plastid	16.25	11.48
Bra011081.1-P	Field mustard	cytosol	41.25	9.32

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A287TKV9	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU6Hr1G022660	EnsemblPlants:HORVU6Hr1G022660.15	InterPro:IPR006195	InterPro:NA-bd_OB-fold
PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF50249
SUPFAM:SSF55681	UniParc:UPI000B484BC3	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:72596213..72598218

Molecular Weight (calculated)

44889.1 Da

IEP (calculated)

9.930

GRAVY (calculated)

-0.366

Length

400 amino acids

Sequence
(BLAST)

001: SAPEPTPRLD PARPASPPLP RARVAREPAE SGGRRARHHW RAPRGPGHRR RFVRRIRRGL VAGRAARDGA IQSKAISGRS WTDIGDVDET SAGHSVLIRG
101: FAQTIRPVSK KMGFVVLRQR RSTVQCLLVA STDAGVSAQM VRFAASLTKE SIVDVEGIVT PLKEPRKDLT QLVEIRVSKI YCTNRAISTL PLNFEDAART
201: KAEFEAAEQK GVPMVHVHQD TRLNYRPIDI RTPANLSTFS IEHHVENKFR EFLFSKNFIG IHTPKLIGGS SEGGASVFKL DYNGQPACLA QSPQLYKQMA
301: ICGGFGRVFE VGSIFRAEKS NTHRHLCEFI GLDAEMEIKE HYFEVCDIID GLFVAIFDHL NEHCKEELKE INRQNPFEPL TYLVQTLKLT YEQGIQMLKM

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.