CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008975_P002	Maize	cytosol	95.06	95.41
Zm00001d015168_P001	Maize	extracellular, plasma membrane	95.06	95.24
Os02t0686400-01	Rice	extracellular	90.86	90.53
TraesCS5D01G165200.1	Wheat	cytosol, golgi	87.39	87.87
TraesCS5A01G160100.2	Wheat	cytosol	87.57	87.73
HORVU5Hr1G050160.1	Barley	cytosol	87.2	87.68
TraesCS5B01G157800.1	Wheat	cytosol	87.2	87.04
HORVU7Hr1G107410.1	Barley	cytosol	76.97	78.11
CDX73541	Canola	cytosol	26.87	70.33
KRH15638	Soybean	nucleus	67.82	68.32
KRH05378	Soybean	nucleus	67.46	67.83
VIT_04s0008g03010.t01	Wine grape	cytosol	67.28	67.65
Solyc05g056250.2.1	Tomato	plastid	66.36	66.73
HORVU6Hr1G022660.15	Barley	cytosol	48.08	65.75
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	46.8	64.65
CDX68726	Canola	extracellular	63.44	63.21
CDY28248	Canola	cytosol	63.44	63.21
Bra011251.1-P	Field mustard	cytosol	63.25	63.02
AT4G31180.1	Thale cress	cytosol	64.17	62.9
OQU84347	Sorghum	cytosol	55.94	61.57
CDY35247	Canola	cytosol	59.23	61.25
HORVU4Hr1G090760.1	Barley	cytosol	44.97	61.04
AT4G26870.1	Thale cress	cytosol	58.68	60.34
CDY14727	Canola	cytosol	58.68	59.78
CDX78190	Canola	cytosol	19.01	59.09
Bra007014.1-P	Field mustard	cytosol	19.01	59.09
CDY13418	Canola	cytosol	59.6	59.06
Bra024018.1-P	Field mustard	cytosol	59.6	59.06
CDX72297	Canola	cytosol	59.23	58.48
GSMUA_Achr10P...	Banana	cytosol	14.26	53.42
CDY06845	Canola	nucleus	46.07	49.7
KXG36232	Sorghum	mitochondrion	20.48	20.29
EER95098	Sorghum	cytosol	20.48	19.96
EER90985	Sorghum	cytosol	20.48	19.96
Bra011081.1-P	Field mustard	cytosol	56.31	17.4

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A1B6Q0S3	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	EnsemblPlants:KXG31524	ProteinID:KXG31524
ProteinID:KXG31524.1	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862
PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	EnsemblPlantsGene:SORBI_3003G012200	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458
UniParc:UPI0001C80AC7	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:1059615..1064279

Molecular Weight (calculated)

60973.0 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.287

Length

547 amino acids

Sequence
(BLAST)

001: MSSEPPPAAS SATGAEELSA DLSAATLSKK QQKKDARKAE KAEKAAQRQQ QQQQPVDAED PFAANYGDVP VEEIQSKVIS GRSWTQIGDL DDSAAGRSVL
101: IRGAAQAFRP VSKKMAFVVL RQRMSTVQCV LVASADAGVS TQMVRFATAL SKESIVDVEG VVSLPKEPLK ATTQQVEIQV RKIYCINRAI PTLPINLEDA
201: ARSEADFEKA ELAGEKLVRV GQDTRLNYRA IDLRTPSNQA VFRIQCQVEN KFREFLLSKD FVGIHTPKLI SGSSEGGAAV FKLLYNGQPA CLAQSPQLYK
301: QMAICGGFER VFEVGPVFRA ENSNTHRHLC EFVGLDAEME IKEHYFEVCD IIDGLFVSIF KHLTENCKKE LETINRQYPF EPLKYLDKTL KLTYEEGIQM
401: LKEAGTEIEP MGDLNTEAEK KLGRLVREKY NTDFFILYRY PLAVRPFYTM PCYDNPAYTN SFDVFIRGEE IISGAQRIHT PELLAKRATE CGIDVSTISA
501: YIESFSYGAP PHGGFGVGLE RVVMLFCALN NIRKTSMFPR DPQRLVP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.