CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021507_P002	Maize	plastid	96.74	97.27
Zm00001d006377_P001	Maize	mitochondrion	96.2	96.72
TraesCS2A01G231500.2	Wheat	cytosol	70.29	91.51
TraesCS2D01G235900.1	Wheat	mitochondrion	85.33	88.87
TraesCS2B01G255900.2	Wheat	mitochondrion	86.05	88.62
HORVU2Hr1G049240.1	Barley	mitochondrion	85.33	88.04
Os07t0485400-01	Rice	cytosol	34.6	87.21
Bra026243.1-P	Field mustard	plastid	74.28	72.82
CDY42978	Canola	plastid	74.28	72.82
Solyc03g019940.2.1	Tomato	plastid	74.82	72.33
PGSC0003DMT400039341	Potato	mitochondrion, plastid	74.64	72.15
Bra021059.1-P	Field mustard	plastid	73.19	71.89
CDY58174	Canola	plastid	73.19	71.89
CDY35583	Canola	plastid	72.28	71.25
VIT_00s0229g00020.t01	Wine grape	plastid	75.18	71.06
CDY50134	Canola	plastid	72.28	71.0
KRH04132	Soybean	plastid	70.11	70.36
KRH57405	Soybean	plastid	70.11	70.24
AT4G17300.2	Thale cress	cytosol, plastid	72.46	68.14
GSMUA_Achr2P18500_001	Banana	plasma membrane	76.27	50.78
EER90985	Sorghum	cytosol	48.37	47.59
EER95098	Sorghum	cytosol	48.19	47.42
OQU84347	Sorghum	cytosol	19.57	21.73
KXG31524	Sorghum	cytosol	20.29	20.48

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A1B6QE81	InterPro:Asn-tRNA-ligase
InterPro:Asp/Asn-tRNA-synth_IIb	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006421	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0019538
GO:GO:0048481	InterPro:IPR006195	EnsemblPlants:KXG36232	ProteinID:KXG36232	ProteinID:KXG36232.1	HAMAP:MF_00534
InterPro:NA-bd_OB-fold	InterPro:NA-bd_OB_tRNA	PFAM:PF00152	PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862
PANTHER:PTHR22594	PANTHER:PTHR22594:SF44	EnsemblPlantsGene:SORBI_3002G304100	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00457
UniParc:UPI00081AB6CD	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:+:67977026..67982284

Molecular Weight (calculated)

60855.2 Da

IEP (calculated)

6.296

GRAVY (calculated)

-0.203

Length

552 amino acids

Sequence
(BLAST)

001: MAAAAAARLL RLAPRRLQVP KASPLAALSF PLPRTAPLAA AASGRRQRFC AAAQASASAP AAAATGAAGE AVGEFRKRLR VADVKGGEDE GAAWVGKELT
101: VRGWVRTCRA QRTVTFVEVN DGSCLSNMQC VLTPDTEGYD QIDSVTTGAS VLVEGVVASS QGGKQKVELK VSKITVIGKS DPTSFPIQKK RASREFLRTV
201: AHLRPRTNTF GAVARVRNAL AYATHKFFQD NGFVWVSSPI ITASDCEGAG EQFYVTTLLS NSAEGGSLLK DIPATKDGRV DWSQDFFCKP AFLTVSGQLN
301: GETYASALSD IYTFGPTFRA ENSNTARHLA EFWMIEPELA FADLNDDMAC ATAYLQYVVK YILENCKEDM DFFNTWVEKG IIDRLNDVVE KNFIHLSYTD
401: AVELLLGSKK EFEFPVKWGL DLQSEHERYI TEVALGGRPV IIRDYPKEIK AFYMRENNDG KTVAAMDLLV PRVGELIGGS QREERLDYLE ARLDEQNLNK
501: ESYWWYLDLR RYGSVPHAGF GLGFERLVQF ATGIDNIRDA IPFPRVPGSA EF

Best Arabidopsis Sequence Match ( AT4G17300.2 )
(BLAST)

001: MFQYEEEDSR NPKTVNDSIT MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT AVSESLGSGD GNKVESYEKR
101: FGSKVGEFRK KLRIAEVKGG ADEGLSRVGQ SLNIMGWVRT LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ
201: KVELKVEKII VVGECDSSYP IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT
301: DTSIDAIPKT KGGLIDWSQD FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD DDMACATAYL QYVVKYVLDN
401: CKEDMEFFDT WIEKGIIRRL SDVAEKEFLQ LGYTDAIEIL LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA
501: MDMLVPRIGE LIGGSQREER LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE RLVQFVTGID NIRDVIPFPR TPASAEF

Arabidopsis Description

NS1Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Source:TAIR;Acc:AT4G17300]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.