Factsheet for TraesCS2A01G231500.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0485400-01	Rice	cytosol	43.63	84.47
TraesCS2D01G235900.1	Wheat	mitochondrion	98.82	79.06
TraesCS2B01G255900.2	Wheat	mitochondrion	98.82	78.17
HORVU2Hr1G049240.1	Barley	mitochondrion	97.88	77.57
Zm00001d021507_P002	Maize	plastid	92.22	71.22
Zm00001d006377_P001	Maize	mitochondrion	91.51	70.67
KXG36232	Sorghum	mitochondrion	91.51	70.29
KRH57405	Soybean	plastid	81.13	62.43
KRH04132	Soybean	plastid	80.9	62.36
Bra021059.1-P	Field mustard	plastid	80.9	61.03
CDY58174	Canola	plastid	80.9	61.03
Bra026243.1-P	Field mustard	plastid	80.9	60.92
CDY42978	Canola	plastid	80.66	60.75
PGSC0003DMT400039341	Potato	mitochondrion, plastid	81.6	60.6
CDY50134	Canola	plastid	80.19	60.5
Solyc03g019940.2.1	Tomato	plastid	81.37	60.42
VIT_00s0229g00020.t01	Wine grape	plastid	82.08	59.59
CDY35583	Canola	plastid	78.54	59.46
AT4G17300.2	Thale cress	cytosol, plastid	80.66	58.26
TraesCS7A01G031700.1	Wheat	cytosol	54.72	45.31
TraesCS1A01G102600.1	Wheat	golgi	56.84	42.58
GSMUA_Achr2P18500_001	Banana	plasma membrane	82.55	42.22
TraesCS2A01G584300.1	Wheat	cytosol	51.89	39.57
TraesCS5A01G160100.2	Wheat	cytosol	24.53	19.05
TraesCS5A01G327900.1	Wheat	cytosol	24.29	18.63
TraesCS1A01G111100.1	Wheat	cytosol	22.88	18.27

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asn-tRNA-ligase	InterPro:Asp/Asn-tRNA-synth_IIb
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006421	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	HAMAP:MF_00534	PFAM:PF00152	PRINTS:PR01042
PFscan:PS50862	PANTHER:PTHR22594	PANTHER:PTHR22594:SF44	SUPFAM:SSF55681	TIGRFAMs:TIGR00457	EnsemblPlantsGene:TraesCS2A01G231500
EnsemblPlants:TraesCS2A01G231500.2	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	TIGR:cd00776	TIGR:cd04318	:

Description

No Description!

Coordinates

chr2A:+:271893131..271909842

Molecular Weight (calculated)

47395.0 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.219

Length

424 amino acids

Sequence
(BLAST)

001: MQCVLTPETE GYDQIDSINT GASVLVDGVV ASSQGGKQKV ELKVSKIIVI GESDPTSFPI QKKRASREFL RTVAHLRPRT NTFGAVARVR NALAYATHKF
101: FQDSGFIWVS SPIITASDCE GAGEQFYVTT LLSNSAEGGC LVNSIPSKDG RVDWSQDFFC KPAFLTVSGQ LNGETYASAL SDIYTFGPTF RAENSNTSRH
201: LAEFWMIEPE LAFADLNDDM ACASAYLQYV VKYILENCKE DMVFFDTWVE KGIIDRLNNV AEKNFVQMSY SDAIKLLIGS NKKFEFPVKW GLDLQSEHER
301: YITEVAFGGS PVIIRDYPKE IKAFYMRQND DGKTVAAMDL LVPGVGELIG GSQREERLDY LEGRLDESNL NKDSYWWYLD LRRYGSVPHA GFGLGFERLV
401: QFATGIDNIR DAIPFPRVPG SAEF

Best Arabidopsis Sequence Match ( AT4G17300.1 )
(BLAST)

001: MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT AVSESLGSGD GNKVESYEKR FGSKVGEFRK KLRIAEVKGG
101: ADEGLSRVGQ SLNIMGWVRT LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ KVELKVEKII VVGECDSSYP
201: IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT DTSIDAIPKT KGGLIDWSQD
301: FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD DDMACATAYL QYVVKYVLDN CKEDMEFFDT WIEKGIIRRL
401: SDVAEKEFLQ LGYTDAIEIL LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA MDMLVPRIGE LIGGSQREER
501: LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE RLVQFVTGID NIRDVIPFPR TPASAEF

Arabidopsis Description

NS1Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Source:TAIR;Acc:AT4G17300]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.