Factsheet for Bra021059.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58174	Canola	plastid	98.4	98.4
CDY50134	Canola	plastid	97.86	97.86
Bra026243.1-P	Field mustard	plastid	91.64	91.47
AT4G17300.2	Thale cress	cytosol, plastid	91.99	88.08
TraesCS2A01G231500.2	Wheat	cytosol	61.03	80.9
VIT_00s0229g00020.t01	Wine grape	plastid	78.83	75.86
KRH04132	Soybean	plastid	74.02	75.64
KRH57405	Soybean	plastid	74.02	75.5
Os07t0485400-01	Rice	cytosol	29.36	75.34
Solyc03g019940.2.1	Tomato	plastid	75.62	74.43
TraesCS2D01G235900.1	Wheat	mitochondrion	70.11	74.34
PGSC0003DMT400039341	Potato	mitochondrion, plastid	75.44	74.26
TraesCS2B01G255900.2	Wheat	mitochondrion	70.46	73.88
Zm00001d021507_P002	Maize	plastid	71.53	73.22
KXG36232	Sorghum	mitochondrion	71.89	73.19
HORVU2Hr1G049240.1	Barley	mitochondrion	69.57	73.08
Zm00001d006377_P001	Maize	mitochondrion	71.17	72.86
Bra006861.1-P	Field mustard	cytosol	49.47	50.09
GSMUA_Achr2P18500_001	Banana	plasma membrane	72.78	49.34
Bra002799.1-P	Field mustard	cytosol	49.11	48.0
Bra002754.1-P	Field mustard	cytosol	36.83	34.67
Bra029647.1-P	Field mustard	cytosol	36.3	32.18
Bra001250.1-P	Field mustard	cytosol	35.41	31.94
Bra011251.1-P	Field mustard	cytosol	21.0	21.49
Bra024018.1-P	Field mustard	cytosol	21.0	21.38
Bra007014.1-P	Field mustard	cytosol	4.27	13.64
Bra011081.1-P	Field mustard	cytosol	19.04	6.05

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	Gene3D:2.40.50.140	InterPro:Asn-tRNA-ligase	InterPro:Asp/Asn-tRNA-synth_IIb	EnsemblPlantsGene:Bra021059
EnsemblPlants:Bra021059.1	EnsemblPlants:Bra021059.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006421	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
InterPro:IPR006195	UniProt:M4DX13	HAMAP:MF_00534	InterPro:NA-bd_OB-fold	InterPro:NA-bd_OB_tRNA	PFAM:PF00152
PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR22594	PANTHER:PTHR22594:SF44	SUPFAM:SSF50249
SUPFAM:SSF55681	TIGRFAMs:TIGR00457	UniParc:UPI0002547090	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg

Description

AT4G17300 (E=7e-272) NS1, OVA8, ATNS1 | NS1; asparagine-tRNA ligase

Coordinates

chrA08:+:10133499..10136538

Molecular Weight (calculated)

62938.8 Da

IEP (calculated)

6.221

GRAVY (calculated)

-0.263

Length

562 amino acids

Sequence
(BLAST)

001: MAAKFLPATT LRLTPFSSLR FLSFFPSSYP LFSPLRRPSF EGFPANARRR CFCTAVSEST GSGEGKKVDN SYENRFGSRV GEFRRKLKIA EVKGGADQGL
101: GRVGQSLSIM GWVRTLRSQS SVTFIEINDG SCLSNLQCVM NPDAEGYDQV ESGSVLTGAS ISVQGTIVAS QGTKQKVELK VEKIIVVGKC DSSYPIQKKR
201: VSREFLRTKA HLRPRTNTFG AVARVRNALA YATHKFFQES GFVWVASPII TASDCEGAGE QFCVTTLIPS SHETTDSSID AIPKTKGGLV DWSQDFFGKP
301: AFLTVSGQLN GETYATALSD VYTFGPTFRA ENSNTSRHLA EFWMIEPELA FADLNDDMAC ATAYLQYVVK YVLDNCKEDM EFFDTWIEKG IIHRLSEVVE
401: KEFLQLGYTD AIELLLKANK KFEFPVKWGL DLQSEHERYI TEEAFGGRPV IIRDYPKEIK AFYMRENDDG KTVAAMDMLV PRIGELIGGS QREERLEVLE
501: ARLDELKLDK ESYWWYLDLR RYGSVPHAGF GLGFERLVQF ATGIDNIRDV IPFPRSPGSA DF

Best Arabidopsis Sequence Match ( AT4G17300.2 )
(BLAST)

001: MFQYEEEDSR NPKTVNDSIT MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT AVSESLGSGD GNKVESYEKR
101: FGSKVGEFRK KLRIAEVKGG ADEGLSRVGQ SLNIMGWVRT LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ
201: KVELKVEKII VVGECDSSYP IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT
301: DTSIDAIPKT KGGLIDWSQD FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD DDMACATAYL QYVVKYVLDN
401: CKEDMEFFDT WIEKGIIRRL SDVAEKEFLQ LGYTDAIEIL LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA
501: MDMLVPRIGE LIGGSQREER LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE RLVQFVTGID NIRDVIPFPR TPASAEF

Arabidopsis Description

NS1Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Source:TAIR;Acc:AT4G17300]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.