Factsheet for Os07t0485400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion, plastid
PProwler:	secretory
TargetP:	secretory
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G231500.2	Wheat	cytosol	84.47	43.63
TraesCS2D01G235900.1	Wheat	mitochondrion	86.3	35.66
HORVU2Hr1G049240.1	Barley	mitochondrion	86.3	35.33
TraesCS2B01G255900.2	Wheat	mitochondrion	86.3	35.26
Zm00001d006377_P001	Maize	mitochondrion	87.21	34.79
Zm00001d021507_P002	Maize	plastid	86.76	34.61
KXG36232	Sorghum	mitochondrion	87.21	34.6
KRH04132	Soybean	plastid	77.17	30.73
KRH57405	Soybean	plastid	76.71	30.49
Bra021059.1-P	Field mustard	plastid	75.34	29.36
CDY58174	Canola	plastid	75.34	29.36
CDY50134	Canola	plastid	74.89	29.18
PGSC0003DMT400039341	Potato	mitochondrion, plastid	74.89	28.72
Solyc03g019940.2.1	Tomato	plastid	74.89	28.72
CDY42978	Canola	plastid	73.52	28.6
Bra026243.1-P	Field mustard	plastid	73.52	28.6
CDY35583	Canola	plastid	73.06	28.57
VIT_00s0229g00020.t01	Wine grape	plastid	75.34	28.25
AT4G17300.2	Thale cress	cytosol, plastid	75.34	28.11
Os01t0372700-01	Rice	plastid	54.34	21.29
GSMUA_Achr2P18500_001	Banana	plasma membrane	73.52	19.42
Os02t0139600-01	Rice	cytosol	22.83	14.16
Os12t0414500-01	Rice	plasma membrane	39.27	13.98
Os02t0686400-01	Rice	extracellular	24.2	9.65

Protein Annotations

MapMan:17.2.3	Gene3D:3.30.930.10	UniProt:A0A0P0X6F8	ProteinID:BAT01519.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006421	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:Os07g0485400	EnsemblPlants:Os07t0485400-01	PFAM:PF00152	PANTHER:PTHR22594	PANTHER:PTHR22594:SF44
SUPFAM:SSF55681	UniParc:UPI000393A817	InterPro:aa-tRNA-synt_II	:	:	:

Description

Similar to asparaginyl-tRNA synthetase. (Os07t0485400-01)

Coordinates

chr7:+:17838560..17844966

Molecular Weight (calculated)

24015.3 Da

IEP (calculated)

7.436

GRAVY (calculated)

-0.014

Length

219 amino acids

Sequence
(BLAST)

001: YILLVNIFIG GCQIDSITTG ASVLVEGVIA SSQGGKQKVE LKVSKISVIG ESDPTSFPIQ KKRASREFLR TVAHLRPRTN TFGAVARVRN ALAYATHKFF
101: QDNGFVWVAS PIITASDCEG AGEQFYVTTL ISNSAEGGSL VKDIPSTKDG RVDWSQDFFC KPAFLTVSGQ LNGETYATAL SDVYTFGPTF RAENSNTSRH
201: LAEFWVSQYS FTFMFLSEF

Best Arabidopsis Sequence Match ( AT4G17300.2 )
(BLAST)

001: MFQYEEEDSR NPKTVNDSIT MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT AVSESLGSGD GNKVESYEKR
101: FGSKVGEFRK KLRIAEVKGG ADEGLSRVGQ SLNIMGWVRT LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ
201: KVELKVEKII VVGECDSSYP IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT
301: DTSIDAIPKT KGGLIDWSQD FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD DDMACATAYL QYVVKYVLDN
401: CKEDMEFFDT WIEKGIIRRL SDVAEKEFLQ LGYTDAIEIL LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA
501: MDMLVPRIGE LIGGSQREER LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE RLVQFVTGID NIRDVIPFPR TPASAEF

Arabidopsis Description

NS1Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Source:TAIR;Acc:AT4G17300]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.