Factsheet for Os02t0139600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84347	Sorghum	cytosol	71.95	51.11
VIT_04s0008g03010.t01	Wine grape	cytosol	62.04	40.26
KRH15638	Soybean	nucleus	61.19	39.78
Os02t0686400-01	Rice	extracellular	61.76	39.71
KRH05378	Soybean	nucleus	60.91	39.52
Solyc05g056250.2.1	Tomato	plastid	60.06	38.97
CDY06845	Canola	nucleus	53.26	37.08
AT4G26870.1	Thale cress	cytosol	54.11	35.9
CDX68726	Canola	extracellular	55.52	35.7
CDY35247	Canola	cytosol	53.26	35.54
CDY28248	Canola	cytosol	55.24	35.52
Bra011251.1-P	Field mustard	cytosol	55.24	35.52
AT4G31180.1	Thale cress	cytosol	55.81	35.3
CDX72297	Canola	cytosol	53.54	34.12
CDY13418	Canola	cytosol	53.26	34.06
Bra024018.1-P	Field mustard	cytosol	53.26	34.06
CDY14727	Canola	cytosol	51.56	33.89
CDX73541	Canola	cytosol	17.56	29.67
TraesCS1A01G111100.1	Wheat	cytosol	43.06	28.63
Os07t0485400-01	Rice	cytosol	14.16	22.83
CDX78190	Canola	cytosol	11.05	22.16
Bra007014.1-P	Field mustard	cytosol	11.05	22.16
HORVU1Hr1G024420.4	Barley	mitochondrion	26.63	21.56
Os01t0372700-01	Rice	plastid	20.68	13.06
Bra011081.1-P	Field mustard	cytosol	53.26	10.62
Os12t0414500-01	Rice	plasma membrane	17.56	10.08

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A0P0VEM7	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
ProteinID:BAS76907.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004812
GO:GO:0004815	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	InterPro:NA-bd_OB-fold
InterPro:NA-bd_OB_tRNA	EnsemblPlantsGene:Os02g0139600	EnsemblPlants:Os02t0139600-01	PFAM:PF00152	PFAM:PF01336	PRINTS:PR01042
PFscan:PS50862	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF50249	SUPFAM:SSF55681	UniParc:UPI0000DF053C
InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:

Description

Similar to Aspartyl-tRNA synthetase. (Os02t0139600-01);Similar to predicted protein. (Os02t0139600-02)

Coordinates

chr2:+:2124897..2128513

Molecular Weight (calculated)

37718.7 Da

IEP (calculated)

5.436

GRAVY (calculated)

-0.192

Length

353 amino acids

Sequence
(BLAST)

001: MSTGDDDNHG DPLQQQPEEE DGGGYGDVAV GGGLFSVPGY EWADVAALGP DVAGRAVRVR GAAHAVRAVG RRVAFLVLRQ GSSTVQCVVG GGGGGGGGGD
101: AGVARFAAGL SRESVVDVAG VVSLPREPVR GTTQQEVEIQ VKKLYCISKA TPNLPISVDD AARSEEDVVK AKAAGEQLVH VGQDKRLDFR VIDLRTPANQ
201: AIFRVQCEIE NIFRQVLLSE GFVGIHTPKL IGGSSEGGAA VFKLDYNGQP ACLAQSPQLH KQMAICGGFE RVFEVGPVFR AEDSNTHRHL CEFVGLDMEM
301: AIKGHYSEVC DVVDRLFVAM FDHLNKNCAK ELEAINRQYP FKPLKETDRS TTS

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.