Factsheet for Bra007014.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78190	Canola	cytosol	100.0	100.0
GSMUA_Achr10P...	Banana	cytosol	28.41	34.25
AT4G31180.1	Thale cress	cytosol	85.23	26.88
Bra024018.1-P	Field mustard	cytosol	77.84	24.82
Bra011251.1-P	Field mustard	cytosol	76.14	24.41
Solyc05g056250.2.1	Tomato	plastid	72.73	23.53
GSMUA_Achr3P05380_001	Banana	cytosol	53.98	23.46
KRH05378	Soybean	nucleus	65.34	21.14
VIT_04s0008g03010.t01	Wine grape	cytosol	64.77	20.96
KRH15638	Soybean	nucleus	63.64	20.63
Os02t0686400-01	Rice	extracellular	62.5	20.04
TraesCS5D01G165200.1	Wheat	cytosol, golgi	60.8	19.67
TraesCS5A01G160100.2	Wheat	cytosol	60.8	19.6
HORVU5Hr1G050160.1	Barley	cytosol	60.23	19.49
HORVU5Hr1G083090.1	Barley	cytosol, plastid	59.66	19.16
TraesCS5B01G157800.1	Wheat	cytosol	59.66	19.16
TraesCS5D01G333800.2	Wheat	cytosol	60.23	19.06
Zm00001d015168_P001	Maize	extracellular, plasma membrane	59.09	19.05
KXG31524	Sorghum	cytosol	59.09	19.01
TraesCS5B01G327800.1	Wheat	cytosol, plastid	59.09	18.91
HORVU7Hr1G107410.1	Barley	cytosol	57.39	18.74
TraesCS5A01G327900.1	Wheat	cytosol	58.52	18.63
Zm00001d008975_P002	Maize	cytosol	57.39	18.53
OQU84347	Sorghum	cytosol	51.14	18.11
HORVU1Hr1G024420.4	Barley	mitochondrion	37.5	15.14
TraesCS1A01G111100.1	Wheat	cytosol	39.2	12.99
Os02t0139600-01	Rice	cytosol	22.16	11.05
HORVU6Hr1G022660.15	Barley	cytosol	21.59	9.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	21.02	9.34
HORVU4Hr1G090760.1	Barley	cytosol	17.61	7.69
Bra029647.1-P	Field mustard	cytosol	22.16	6.15
Bra001250.1-P	Field mustard	cytosol	21.59	6.1
Bra006861.1-P	Field mustard	cytosol	18.75	5.95
Bra011081.1-P	Field mustard	cytosol	59.66	5.93
Bra002754.1-P	Field mustard	cytosol	19.89	5.86
Bra002799.1-P	Field mustard	cytosol	18.75	5.74
TraesCS7B01G222700.1	Wheat	cytosol	10.23	5.73
Bra021059.1-P	Field mustard	plastid	13.64	4.27
Bra026243.1-P	Field mustard	plastid	13.64	4.26

Protein Annotations

MapMan:17.2.4	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	EnsemblPlantsGene:Bra007014	EnsemblPlants:Bra007014.1	EnsemblPlants:Bra007014.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	UniProt:M4CS22	PFAM:PF00152	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1
SUPFAM:SSF55681	UniParc:UPI0002542F92	InterPro:aa-tRNA-synt_II	:	:	:

Description

AT4G31180 (E=3e-062) | aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative

Coordinates

chrA09:-:26829439..26830558

Molecular Weight (calculated)

20636.6 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.486

Length

176 amino acids

Sequence
(BLAST)

001: MSREEEEHDE FSSNYGDVTL NELQQTADPK AGKWREAVEG KKWTEIMDLV DELFVFIFTE LNEKCKKELE AVGKQYPFEP LKFLEKTLRL TFEEGIQMLK
101: EAGVEVDPLG DLNTESERKL GQLVLEKYKT VFYILHRFPT AVRPFYTMPC ADNPLYSNSF DVFIRGMSYF FSKRTL

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.