Factsheet for HORVU5Hr1G083090.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G333800.2	Wheat	cytosol	85.77	84.53
TraesCS5A01G327900.1	Wheat	cytosol	85.04	84.27
TraesCS5B01G327800.1	Wheat	cytosol, plastid	84.31	84.0
HORVU5Hr1G050160.1	Barley	cytosol	67.7	68.2
CDX73541	Canola	cytosol	25.91	67.94
HORVU7Hr1G107410.1	Barley	cytosol	62.77	63.82
KRH15638	Soybean	nucleus	59.49	60.04
KRH05378	Soybean	nucleus	59.31	59.74
CDX78190	Canola	cytosol	19.16	59.66
Bra007014.1-P	Field mustard	cytosol	19.16	59.66
Solyc05g056250.2.1	Tomato	plastid	57.85	58.27
VIT_04s0008g03010.t01	Wine grape	cytosol	56.93	57.35
AT4G26870.1	Thale cress	cytosol	52.92	54.51
CDX68726	Canola	extracellular	54.56	54.46
Bra011251.1-P	Field mustard	cytosol	54.38	54.28
CDY28248	Canola	cytosol	54.38	54.28
CDY35247	Canola	cytosol	52.37	54.25
AT4G31180.1	Thale cress	cytosol	55.11	54.12
CDY14727	Canola	cytosol	51.28	52.33
CDY13418	Canola	cytosol	52.55	52.17
Bra024018.1-P	Field mustard	cytosol	52.55	52.17
HORVU6Hr1G022660.15	Barley	cytosol	37.96	52.0
CDX72297	Canola	cytosol	52.37	51.81
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	36.86	51.01
GSMUA_Achr10P...	Banana	cytosol	13.5	50.68
HORVU4Hr1G090760.1	Barley	cytosol	35.4	48.14
CDY06845	Canola	nucleus	41.06	44.38
HORVU1Hr1G024420.4	Barley	mitochondrion	33.39	41.97
HORVU2Hr1G049240.1	Barley	mitochondrion	20.99	21.5
HORVU1Hr1G021130.2	Barley	plastid	21.53	20.85
Bra011081.1-P	Field mustard	cytosol	49.27	15.25

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A287S1L0	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G083090	EnsemblPlants:HORVU5Hr1G083090.1	InterPro:IPR006195	HAMAP:MF_02075
InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249
SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI000B4678FF	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:569270951..569274465

Molecular Weight (calculated)

61125.1 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.358

Length

548 amino acids

Sequence
(BLAST)

001: MSSETAPEAE LSTALSAATV SNKQRKRDTR KAEKAAKREQ QKPAAEDPSP EKEQKPSAED DPSAGNYGDV LPVPGEILPA AVPYGPWAEI GHLDRASVGR
101: SVLVRGTAQA AYCGSKTKKV AFLELRQGMS TVQCVLAGSA QMALFALSLP KESVVFVEGA VALLDKPLRY TTVQEVEIQV RKLYCVSRAK PKLPISVEDA
201: GRSAEEFAMA EANGVQLPRV GQDTRLNHPA INLRTPAVQA IFRIKHQIEH KFREYLSSRD FIGIHTPKLI SGSSEGGAAV FKLEYKNGKT ACLAQSPQLH
301: KQMAICGGLR RVFEVGHIFR AEDSNTHRHL CEFVGMDAEM EIMRHYFEVC DIVDGFFVEL FRHLNENCRT ALEAVNRQYP FEPLKYLENT LRLSYEEGIQ
401: MLKEAGTEVE PMGDLNTEAE RKLGQLVREK YDTDFFILYR YPLAARPFYT MPCYENPAYS NSFDVFLRGE EIISGAQRIH EPELLAKRVA EHGIDKSSIK
501: SYLESFSYGT PPHGGFGIGL ERVVKLFCGL DDIRMASLFP RDPQRLSP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.