Factsheet for HORVU7Hr1G107410.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G022660.15	Barley	cytosol	60.48	81.5
HORVU5Hr1G050160.1	Barley	cytosol	82.0	81.25
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	59.37	80.81
HORVU4Hr1G090760.1	Barley	cytosol	57.88	77.42
Os02t0686400-01	Rice	extracellular	78.85	77.41
KXG31524	Sorghum	cytosol	78.11	76.97
Zm00001d015168_P001	Maize	extracellular, plasma membrane	77.55	76.56
Zm00001d008975_P002	Maize	cytosol	76.62	75.78
CDX73541	Canola	cytosol	25.79	66.51
HORVU5Hr1G083090.1	Barley	cytosol, plastid	63.82	62.77
Solyc05g056250.2.1	Tomato	plastid	63.08	62.5
KRH15638	Soybean	nucleus	62.89	62.43
KRH05378	Soybean	nucleus	62.89	62.32
VIT_04s0008g03010.t01	Wine grape	cytosol	62.34	61.76
CDX68726	Canola	extracellular	60.3	59.2
Bra011251.1-P	Field mustard	cytosol	60.11	59.02
CDY28248	Canola	cytosol	60.11	59.02
AT4G31180.1	Thale cress	cytosol	60.48	58.42
CDX78190	Canola	cytosol	18.74	57.39
Bra007014.1-P	Field mustard	cytosol	18.74	57.39
CDY35247	Canola	cytosol	55.84	56.9
CDY13418	Canola	cytosol	57.88	56.52
Bra024018.1-P	Field mustard	cytosol	57.88	56.52
AT4G26870.1	Thale cress	cytosol	55.47	56.2
CDX72297	Canola	cytosol	57.33	55.78
CDY14727	Canola	cytosol	55.1	55.31
GSMUA_Achr10P...	Banana	cytosol	14.47	53.42
CDY06845	Canola	nucleus	42.86	45.56
HORVU1Hr1G024420.4	Barley	mitochondrion	33.58	41.51
HORVU2Hr1G049240.1	Barley	mitochondrion	20.04	20.19
HORVU1Hr1G021130.2	Barley	plastid	20.78	19.79
Bra011081.1-P	Field mustard	cytosol	52.69	16.05

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A287XPS3	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G107410	EnsemblPlants:HORVU7Hr1G107410.1	InterPro:IPR006195
HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450
PANTHER:PTHR43450:SF1	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI000B45FC9B	InterPro:aa-tRNA-synt_II
InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:623129143..623135904

Molecular Weight (calculated)

60524.4 Da

IEP (calculated)

6.088

GRAVY (calculated)

-0.354

Length

539 amino acids

Sequence
(BLAST)

001: MSPPPASTEE LEQELSAATI SKKQLKKDAR KAEKARKASE QQQQPPPPPQ EEEDDPFAAN YGDEEIQSKA ISGRSWTDIG DVDETAAGHS VLIRGFAQTI
101: RPVSKKMGFV VLRQRRSTVQ CLLVASADAG VSAQMVRFAA SLTKESIVDV EGIVTPLKEP RKDLTQLVEI RVSKIYCINR AIPTLPLNFE DAARTKAEFE
201: AAEQKGVPMV HVHQDTRLNY RPIDIRTPAN LSIFTIEHHV ESKFKEFLFS KNFIGIHTPK LIGGSSEGGA SVFKLDYNGQ PACLAQSPQL YKQMAICGGF
301: GRVFEVGSVF RAEKSNTHRH LCEFIGLDAE MEIKEHYFEV CDIIDGLFVA IFDHLNEHCK EELEEINRKN PFEPLTYLAQ TLKLTYEQGI QMLKEAGTEI
401: EPMGDLNTEA EKKLGRLVKE MYGTDFFILY RYPLAVRPFY TMPCYDDPAY SNSFDVFIRG EEIISGAQRI HTPKLLRERA IECGIDTSTI RSYIESFSYG
501: APPHGGFGVG LERVVMLFCG LNNVRKTSLF PRDPQRLTP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.