Factsheet for HORVU2Hr1G049240.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G231500.2	Wheat	cytosol	77.57	97.88
TraesCS2B01G255900.2	Wheat	mitochondrion	97.2	97.01
TraesCS2D01G235900.1	Wheat	mitochondrion	95.7	96.6
Os07t0485400-01	Rice	cytosol	35.33	86.3
Zm00001d021507_P002	Maize	plastid	88.04	85.79
KXG36232	Sorghum	mitochondrion	88.04	85.33
Zm00001d006377_P001	Maize	mitochondrion	87.1	84.88
KRH04132	Soybean	plastid	72.15	70.18
KRH57405	Soybean	plastid	72.15	70.05
Bra026243.1-P	Field mustard	plastid	73.64	69.98
CDY42978	Canola	plastid	73.27	69.63
Bra021059.1-P	Field mustard	plastid	73.08	69.57
CDY58174	Canola	plastid	73.08	69.57
Solyc03g019940.2.1	Tomato	plastid	73.83	69.18
PGSC0003DMT400039341	Potato	mitochondrion, plastid	73.64	69.0
CDY50134	Canola	plastid	72.15	68.68
VIT_00s0229g00020.t01	Wine grape	plastid	74.77	68.49
CDY35583	Canola	plastid	70.84	67.68
AT4G17300.2	Thale cress	cytosol, plastid	72.9	66.44
GSMUA_Achr2P18500_001	Banana	plasma membrane	76.07	49.1
HORVU1Hr1G021130.2	Barley	plastid	49.91	47.17
HORVU5Hr1G083090.1	Barley	cytosol, plastid	21.5	20.99
HORVU5Hr1G050160.1	Barley	cytosol	20.75	20.4
HORVU7Hr1G107410.1	Barley	cytosol	20.19	20.04
HORVU1Hr1G024420.4	Barley	mitochondrion	14.39	17.66
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	12.9	17.42
HORVU4Hr1G090760.1	Barley	cytosol	12.34	16.38
HORVU6Hr1G022660.15	Barley	cytosol	12.15	16.25

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	Gene3D:2.40.50.140	Gene3D:3.30.930.10	EMBL:AK359455	InterPro:Asn-tRNA-ligase
InterPro:Asp/Asn-tRNA-synth_IIb	UniProt:F2D6E3	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006421	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0019538	GO:GO:0048481	EnsemblPlantsGene:HORVU2Hr1G049240	EnsemblPlants:HORVU2Hr1G049240.1	InterPro:IPR006195	HAMAP:MF_00534
InterPro:NA-bd_OB-fold	InterPro:NA-bd_OB_tRNA	PFAM:PF00152	PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862
PANTHER:PTHR22594	PANTHER:PTHR22594:SF44	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00457	UniParc:UPI00020056FE
InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D6E3]

Coordinates

chrchr2H:+:277275295..277297910

Molecular Weight (calculated)

59622.7 Da

IEP (calculated)

5.943

GRAVY (calculated)

-0.220

Length

535 amino acids

Sequence
(BLAST)

001: MAAAASCRLL RLAPHCLRSP RHSLFPTPLA LSLGWRRYCA AAPPVAATAM PTGDAVGEFR RRIRVAEVKG GEDQGTSWVG KELTVRGWVR TCRAQRTVTF
101: VEVNDGSCLS NMQCVLTPET EGYDQIDSIT TGASVLVEGV VASSQGGKQK VDLKVSKIIV IGESDPTSFP IQKKRASREF LRTVAHLRPR TNTFGAVARV
201: RNALAYATHN FFQDNGFIWV SSPIITASDC EGAGEQFYVT TLLSNSAEGG CLVNSIPSKD GRVDWSQDFF CKPAFLTVSG QLNGETYASA LSDIYTFGPT
301: FRAENSNTSR HLAEFWMIEP ELAFADLNDD MACASAYLQY VVKYILENCK EDMDFFDTWV EKGIIDRLNN VAEKNFVQMS YSDAIKLLIG SNKKFEFPVK
401: WGLDLQSEHE RYITEVAFGG HPVIIRDYPK EIKAFYMRQN DDGKTVAAMD LLVPRVGELI GGSQREERLD YLEARLDESN LNKDSYWWYL DLRRYGSVPH
501: AGFGLGFERL VQFATGIDNI RDAIPFPRVP GSAEF

Best Arabidopsis Sequence Match ( AT4G17300.1 )
(BLAST)

001: MAATFLPATS LRLTQNSTLR FLSFFTISNP SYSLFRPLRR RVLPPFDAFP ANSRRRCFCT AVSESLGSGD GNKVESYEKR FGSKVGEFRK KLRIAEVKGG
101: ADEGLSRVGQ SLNIMGWVRT LRSQSSVTFI EINDGSCLSN LQCVMTSDAE GYDQVESGSI LTGASVSVQG TIVASQGTKQ KVELKVEKII VVGECDSSYP
201: IQKKRVSREF LRTKAHLRPR TNTFGAVARV RNTLAYATHK FFQESGFVWV ASPIITASDC EGAGEQFCVT TLIPSSHENT DTSIDAIPKT KGGLIDWSQD
301: FFGKPAFLTV SGQLNGETYA TALSDVYTFG PTFRAENSNT SRHLAEFWMI EPELAFADLD DDMACATAYL QYVVKYVLDN CKEDMEFFDT WIEKGIIRRL
401: SDVAEKEFLQ LGYTDAIEIL LKANKKFDFP VKWGLDLQSE HERYITEEAF GGRPVIIRDY PKEIKAFYMR ENDDGKTVAA MDMLVPRIGE LIGGSQREER
501: LEVLEARLDE LKLNKESYWW YLDLRRYGSV PHAGFGLGFE RLVQFVTGID NIRDVIPFPR TPASAEF

Arabidopsis Description

NS1Class II aminoacyl-tRNA and biotin synthetases superfamily protein [Source:TAIR;Acc:AT4G17300]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.