Factsheet for HORVU4Hr1G090760.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G022660.15	Barley	cytosol	80.4	81.0
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	79.16	80.56
HORVU7Hr1G107410.1	Barley	cytosol	77.42	57.88
HORVU5Hr1G050160.1	Barley	cytosol	64.02	47.43
KXG31524	Sorghum	cytosol	61.04	44.97
Os02t0686400-01	Rice	extracellular	61.04	44.81
Zm00001d015168_P001	Maize	extracellular, plasma membrane	60.3	44.51
Zm00001d008975_P002	Maize	cytosol	60.05	44.4
Solyc05g056250.2.1	Tomato	plastid	50.37	37.32
VIT_04s0008g03010.t01	Wine grape	cytosol	49.13	36.4
KRH15638	Soybean	nucleus	48.64	36.1
KRH05378	Soybean	nucleus	48.64	36.03
HORVU5Hr1G083090.1	Barley	cytosol, plastid	48.14	35.4
GSMUA_Achr10P...	Banana	cytosol	12.41	34.25
CDX68726	Canola	extracellular	46.15	33.88
Bra011251.1-P	Field mustard	cytosol	45.91	33.7
CDY28248	Canola	cytosol	45.91	33.7
AT4G31180.1	Thale cress	cytosol	46.65	33.69
CDY06845	Canola	nucleus	41.69	33.14
CDY35247	Canola	cytosol	42.68	32.51
CDY13418	Canola	cytosol	43.18	31.52
Bra024018.1-P	Field mustard	cytosol	43.18	31.52
CDX72297	Canola	cytosol	43.18	31.41
AT4G26870.1	Thale cress	cytosol	40.69	30.83
CDY14727	Canola	cytosol	40.45	30.35
CDX73541	Canola	cytosol	12.66	24.4
HORVU1Hr1G024420.4	Barley	mitochondrion	23.08	21.33
CDX78190	Canola	cytosol	7.69	17.61
Bra007014.1-P	Field mustard	cytosol	7.69	17.61
HORVU2Hr1G049240.1	Barley	mitochondrion	16.38	12.34
HORVU1Hr1G021130.2	Barley	plastid	16.13	11.48
Bra011081.1-P	Field mustard	cytosol	40.94	9.32

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	UniProt:A0A287Q4U6	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU4Hr1G090760	EnsemblPlants:HORVU4Hr1G090760.1	InterPro:NA-bd_OB-fold	PFAM:PF00152
PRINTS:PR01042	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF50249	SUPFAM:SSF55681	UniParc:UPI000B467BD3
InterPro:aa-tRNA-synt_II	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:645973758..645975776

Molecular Weight (calculated)

37764.4 Da

IEP (calculated)

7.803

GRAVY (calculated)

-0.125

Length

403 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXVAGRAV RDGAIQSKAI SGRSWTDIGD VDETSAGHSV
101: LIRGFAQTIR PVSKKMGFVV LRQRRSSVQC LLVASADAGV SAQMVRFAAS LTKESIVDVE GIVTPLKEPR KDLTQLVEIR VSKIYCINRA ISTLPLNFED
201: AARTKAEFEA AEQKGVPMVH VHQDTRLNYR PIDIRTPANL STFSIEHHVE NLSKFREFLF SKNFIGIHTP KLIGGSSEGG ASVFKLDYNG QPACLAQSPQ
301: LYKQMAICGG FGRVFEVGSI FRAEKSNTHR HLCEFIGLDA EMEIKEHYFE VCDIIDGLFV AIFDHLNEHC KEELKEINWQ NPFEPLTYLA QTLKLSTSKG
401: FKC

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.