CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007014.1-P	Field mustard	cytosol	100.0	100.0
CDX73541	Canola	cytosol	59.09	49.76
GSMUA_Achr10P...	Banana	cytosol	28.41	34.25
AT4G31180.1	Thale cress	cytosol	85.23	26.88
CDY13418	Canola	cytosol	77.84	24.82
CDX68726	Canola	extracellular	76.14	24.41
CDY28248	Canola	cytosol	76.14	24.41
CDX72297	Canola	cytosol	75.57	24.01
Solyc05g056250.2.1	Tomato	plastid	72.73	23.53
GSMUA_Achr3P05380_001	Banana	cytosol	53.98	23.46
CDY35247	Canola	cytosol	67.61	22.5
CDY14727	Canola	cytosol	67.05	21.97
KRH05378	Soybean	nucleus	65.34	21.14
VIT_04s0008g03010.t01	Wine grape	cytosol	64.77	20.96
KRH15638	Soybean	nucleus	63.64	20.63
Os02t0686400-01	Rice	extracellular	62.5	20.04
TraesCS5D01G165200.1	Wheat	cytosol, golgi	60.8	19.67
TraesCS5A01G160100.2	Wheat	cytosol	60.8	19.6
HORVU5Hr1G050160.1	Barley	cytosol	60.23	19.49
TraesCS5B01G157800.1	Wheat	cytosol	59.66	19.16
HORVU5Hr1G083090.1	Barley	cytosol, plastid	59.66	19.16
TraesCS5D01G333800.2	Wheat	cytosol	60.23	19.06
Zm00001d015168_P001	Maize	extracellular, plasma membrane	59.09	19.05
KXG31524	Sorghum	cytosol	59.09	19.01
TraesCS5B01G327800.1	Wheat	cytosol, plastid	59.09	18.91
HORVU7Hr1G107410.1	Barley	cytosol	57.39	18.74
TraesCS5A01G327900.1	Wheat	cytosol	58.52	18.63
Zm00001d008975_P002	Maize	cytosol	57.39	18.53
OQU84347	Sorghum	cytosol	51.14	18.11
CDY06845	Canola	nucleus	51.14	17.75
HORVU1Hr1G024420.4	Barley	mitochondrion	37.5	15.14
TraesCS1A01G111100.1	Wheat	cytosol	39.2	12.99
Os02t0139600-01	Rice	cytosol	22.16	11.05
CDY08000	Canola	cytosol	9.09	10.32
HORVU6Hr1G022660.15	Barley	cytosol	21.59	9.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	21.02	9.34
HORVU4Hr1G090760.1	Barley	cytosol	17.61	7.69
CDY38272	Canola	cytosol	17.61	6.51
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	18.18	6.41
CDY53991	Canola	cytosol	19.32	6.32
CDY28051	Canola	cytosol	22.16	6.16
CDY35930	Canola	cytosol	22.16	6.15
CDY42212	Canola	cytosol	19.32	5.99
CDX74047	Canola	cytosol	21.02	5.94
CDY07998	Canola	cytosol	20.45	5.84
CDY32876	Canola	cytosol, extracellular	18.75	5.74
CDY32766	Canola	cytosol	18.75	5.74
CDY11908	Canola	plastid	18.75	5.74
TraesCS7B01G222700.1	Wheat	cytosol	10.23	5.73
CDX88584	Canola	cytosol	14.77	4.91
CDY58174	Canola	plastid	13.64	4.27
CDY50134	Canola	plastid	13.64	4.27
CDY42978	Canola	plastid	13.64	4.26
CDY35583	Canola	plastid	13.07	4.11

Protein Annotations

MapMan:17.2.4	Gene3D:3.30.930.10	GO:A0A078CMT5	InterPro:Asp-tRNA_synthase_2	EnsemblPlants:CDX78190	ProteinID:CDX78190
ProteinID:CDX78190.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00129503001	PFAM:PF00152	PANTHER:PTHR43450
PANTHER:PTHR43450:SF1	SUPFAM:SSF55681	UniParc:UPI0002542F92	InterPro:aa-tRNA-synt_II	:	:

Description

BnaA09g33850D

Coordinates

chrLK031814:-:1647595..1648714

Molecular Weight (calculated)

20636.6 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.486

Length

176 amino acids

Sequence
(BLAST)

001: MSREEEEHDE FSSNYGDVTL NELQQTADPK AGKWREAVEG KKWTEIMDLV DELFVFIFTE LNEKCKKELE AVGKQYPFEP LKFLEKTLRL TFEEGIQMLK
101: EAGVEVDPLG DLNTESERKL GQLVLEKYKT VFYILHRFPT AVRPFYTMPC ADNPLYSNSF DVFIRGMSYF FSKRTL

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.