Factsheet for TraesCS5A01G327900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G333800.2	Wheat	cytosol	91.68	91.19
TraesCS5B01G327800.1	Wheat	cytosol, plastid	89.51	90.0
HORVU5Hr1G083090.1	Barley	cytosol, plastid	84.27	85.04
CDX73541	Canola	cytosol	26.4	69.86
TraesCS5A01G160100.2	Wheat	cytosol	68.72	69.6
KRH15638	Soybean	nucleus	59.31	60.41
KRH05378	Soybean	nucleus	59.13	60.11
VIT_04s0008g03010.t01	Wine grape	cytosol	58.23	59.19
Solyc05g056250.2.1	Tomato	plastid	57.69	58.64
Bra007014.1-P	Field mustard	cytosol	18.63	58.52
CDX78190	Canola	cytosol	18.63	58.52
CDX68726	Canola	extracellular	55.88	56.28
Bra011251.1-P	Field mustard	cytosol	55.7	56.1
CDY28248	Canola	cytosol	55.7	56.1
AT4G31180.1	Thale cress	cytosol	56.06	55.56
AT4G26870.1	Thale cress	cytosol	52.26	54.32
CDY13418	Canola	cytosol	54.07	54.17
Bra024018.1-P	Field mustard	cytosol	54.07	54.17
CDY35247	Canola	cytosol	51.72	54.06
CDY14727	Canola	cytosol	51.9	53.45
CDX72297	Canola	cytosol	53.35	53.25
GSMUA_Achr10P...	Banana	cytosol	13.92	52.74
TraesCS1A01G111100.1	Wheat	cytosol	44.85	46.7
CDY06845	Canola	nucleus	39.42	43.0
TraesCS2A01G231500.2	Wheat	cytosol	18.63	24.29
TraesCS7A01G031700.1	Wheat	cytosol	21.88	23.63
TraesCS2A01G584300.1	Wheat	cytosol	21.16	21.04
TraesCS1A01G102600.1	Wheat	golgi	20.8	20.32
Bra011081.1-P	Field mustard	cytosol	49.37	15.42

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042
PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	EnsemblPlantsGene:TraesCS5A01G327900
EnsemblPlants:TraesCS5A01G327900.1	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	TIGR:cd00776	TIGR:cd04320	SEG:seg

Description

No Description!

Coordinates

chr5A:-:537135112..537138416

Molecular Weight (calculated)

61575.6 Da

IEP (calculated)

6.881

GRAVY (calculated)

-0.361

Length

553 amino acids

Sequence
(BLAST)

001: MSSEPERPPP APEAGVPAAT LSNKQRKRDA RKAEKAAKYA QQQKPAAEDP SPEHGQQKQQ QPAAAEDDPS AANYGDVLPG EILPAAVPDG PWAEIGRLDK
101: AAAGRSVLVR AWAQAVYRGS KTKNVAFIEL RRGMSTVQCV LAGSAQMMLF ALSLPKESIV VVEGAVALLD NPLRYTTVRE VEIQVRKLYC ISRAAPKLPI
201: SVEDAGRSAE EFAKAEAKGV PLPCVGQDTR LDYRVIDLRT AAGQAVFRVQ HQVENKFREY LSSKDFISIH TPKLISGSSE GGAAVFKLEY KNGKCACLAQ
301: SPQLHKQMAI CGGFCRVFEV GSVFRAEDSN THRHLCEFVG LDAEMEIMRH YFEVCDIVDG LFVELFRHLN ENCKTELEAI NRQYPFEPVK YLESTLRLSY
401: EEGIQMLKEA GTEIEPMADL NTEAEKKLGQ LVREKYDTDF FILYRYPLAA RPFYTMPCYD NPAYSNSFDV FLRGEEIISG AQRIHEPELL AKRAAEHGID
501: KSSIKWYIES FRYGTPPHGG FGAGLERVVM LFCGLNNIRK ASCFPRDPQR LSP

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.