Factsheet for TraesCS5D01G333800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G327800.1	Wheat	cytosol, plastid	94.42	95.45
TraesCS5A01G327900.1	Wheat	cytosol	91.19	91.68
HORVU5Hr1G083090.1	Barley	cytosol, plastid	84.53	85.77
TraesCS5D01G165200.1	Wheat	cytosol, golgi	69.78	71.32
CDX73541	Canola	cytosol	26.26	69.86
KRH15638	Soybean	nucleus	60.43	61.88
KRH05378	Soybean	nucleus	60.43	61.76
Bra007014.1-P	Field mustard	cytosol	19.06	60.23
CDX78190	Canola	cytosol	19.06	60.23
VIT_04s0008g03010.t01	Wine grape	cytosol	58.81	60.11
Solyc05g056250.2.1	Tomato	plastid	58.45	59.74
CDX68726	Canola	extracellular	56.65	57.38
CDY28248	Canola	cytosol	56.47	57.19
Bra011251.1-P	Field mustard	cytosol	56.47	57.19
AT4G31180.1	Thale cress	cytosol	57.19	56.99
AT4G26870.1	Thale cress	cytosol	53.42	55.83
CDY35247	Canola	cytosol	53.06	55.77
CDY13418	Canola	cytosol	54.5	54.89
Bra024018.1-P	Field mustard	cytosol	54.5	54.89
CDX72297	Canola	cytosol	54.5	54.69
CDY14727	Canola	cytosol	52.52	54.38
GSMUA_Achr10P...	Banana	cytosol	14.21	54.11
CDY06845	Canola	nucleus	41.01	44.97
TraesCS7D01G028100.1	Wheat	cytosol	21.22	23.27
TraesCS2D01G235900.1	Wheat	mitochondrion	20.68	21.7
TraesCS1D01G094600.1	Wheat	cytosol	21.04	20.67
Bra011081.1-P	Field mustard	cytosol	50.36	15.82

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152
PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458
EnsemblPlantsGene:TraesCS5D01G333800	EnsemblPlants:TraesCS5D01G333800.2	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	TIGR:cd00776	TIGR:cd04320
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:423544484..423547999

Molecular Weight (calculated)

61522.5 Da

IEP (calculated)

7.018

GRAVY (calculated)

-0.365

Length

556 amino acids

Sequence
(BLAST)

001: MSSEPEKAPP APEAGVPAAT VSNKQRKRDA RKAEKAAKYA QAHAQQKPAA EDPSPEHEKQ KQQQPAAAED DPSAANYGDV LPGEILPAAV PDGPWAEIGH
101: LDTAAAGRSV LVRATAQAVY RGSKTKNVAF LKLRQGMSTV QCVLAGSAQM ALFALSLPKE SIVVVEGAVA LLDEPLSYTT VQEVEIKVRK LYCISRADPK
201: LPISVEDAGR SSAEFAKAEA KGVPLPRVGQ DTRLDYRVID VRTPTGQAIF RIQHQVENKF REHLSSKDFI GIHTPKLISG SSEGGAAVFK LEYKNGKSAC
301: LAQSPQLHKQ MAICGGFRRV FEVGPVFRAE DSNTHRHLCE FVGLDAEMEI MRHYFEVCDI VDGLFVEIFR HLNENCKREL EAINRQYPFE PLKYLESTLR
401: LSYEEGIQML KEAGTEIEPM GDLNTEAEKK LGQLVREKYD TEFFILYRYP LAARPFYTMP CYENPAYSNS FDVFLRGEEI ISGAQRIHEP ELLAKRAAEH
501: GIGKSSIKSY VDSFRYGAPP HGGFGVGLER VVMLFCGLSN VRLASLFPRD PQRLSP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.