CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13418	Canola	cytosol	96.03	96.38
CDX68726	Canola	extracellular	83.94	84.7
CDY28248	Canola	cytosol	83.39	84.15
CDX78190	Canola	cytosol	24.01	75.57
CDX73541	Canola	cytosol	27.8	73.68
CDY35247	Canola	cytosol	68.41	71.64
CDY14727	Canola	cytosol	67.69	69.83
GSMUA_Achr3P05380_001	Banana	cytosol	50.54	69.14
KRH15638	Soybean	nucleus	64.62	65.93
KRH05378	Soybean	nucleus	64.44	65.62
Solyc05g056250.2.1	Tomato	plastid	63.9	65.07
VIT_04s0008g03010.t01	Wine grape	cytosol	62.64	63.79
HORVU5Hr1G050160.1	Barley	cytosol	59.75	60.85
TraesCS5D01G165200.1	Wheat	cytosol, golgi	59.75	60.85
TraesCS5A01G160100.2	Wheat	cytosol	59.93	60.81
TraesCS5B01G157800.1	Wheat	cytosol	59.75	60.4
Os02t0686400-01	Rice	extracellular	59.75	60.29
Zm00001d008975_P002	Maize	cytosol	58.66	59.63
CDY06845	Canola	nucleus	54.33	59.37
KXG31524	Sorghum	cytosol	58.48	59.23
Zm00001d015168_P001	Maize	extracellular, plasma membrane	58.12	58.97
HORVU7Hr1G107410.1	Barley	cytosol	55.78	57.33
OQU84347	Sorghum	cytosol	50.54	56.34
TraesCS5D01G333800.2	Wheat	cytosol	54.69	54.5
TraesCS5B01G327800.1	Wheat	cytosol, plastid	53.43	53.82
Os02t0139600-01	Rice	cytosol	34.12	53.54
TraesCS5A01G327900.1	Wheat	cytosol	53.25	53.35
HORVU5Hr1G083090.1	Barley	cytosol, plastid	51.81	52.37
TraesCS7B01G222700.1	Wheat	cytosol	27.98	49.36
GSMUA_Achr10P...	Banana	cytosol	13.0	49.32
HORVU6Hr1G022660.15	Barley	cytosol	33.57	46.5
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	32.49	45.45
HORVU4Hr1G090760.1	Barley	cytosol	31.41	43.18
TraesCS1A01G111100.1	Wheat	cytosol	39.35	41.05
HORVU1Hr1G024420.4	Barley	mitochondrion	29.96	38.07
CDY08000	Canola	cytosol	7.22	25.81
CDX88584	Canola	cytosol	21.12	22.12
CDY32766	Canola	cytosol	22.38	21.57
CDY11908	Canola	plastid	22.38	21.57
CDY32876	Canola	cytosol, extracellular	22.2	21.39
CDY50134	Canola	plastid	21.48	21.17
CDY53991	Canola	cytosol	20.4	21.0
CDY58174	Canola	plastid	21.3	21.0
CDY42212	Canola	cytosol	21.48	20.95
CDY35583	Canola	plastid	21.12	20.89
CDY42978	Canola	plastid	21.12	20.78
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	17.15	19.04
CDY38272	Canola	cytosol	14.62	17.02
CDX74047	Canola	cytosol	18.95	16.85
CDY28051	Canola	cytosol	18.95	16.59
CDY35930	Canola	cytosol	18.95	16.56
CDY07998	Canola	cytosol	18.41	16.56

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	GO:A0A078C5W1	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
EnsemblPlants:CDX72297	ProteinID:CDX72297	ProteinID:CDX72297.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00099778001	InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042
PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI0004EEBD3C
InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:

Description

BnaC07g43190D

Coordinates

chrLK031796:+:514382..517161

Molecular Weight (calculated)

62778.0 Da

IEP (calculated)

6.583

GRAVY (calculated)

-0.461

Length

554 amino acids

Sequence
(BLAST)

001: MSSEPENPSS STATPPEESG EKISKKAAKK EAAKLEKLRR RQEKEEEEEE ASRKTASLSI EEESFSRNHG DVTLNELKST EDPKAGKWRE AVEGKEWTDV
101: RELVEAMAGT EVLIRGRVHT YRHVSSKKGF LIVRQKGSKV QCVVAESKEN HVSVDMVKFV RQMNRESFVD VIGYVVLPKD PVTGATQQVE IQVRKVYCVN
201: SALQMLPLYV EDAARSEADI QAGKPGANQD TRLNFRVIDL RTPTNQGIFS IQSWIQIGWR ECLLRKGFIE IHSPKLLAGS SEGGSAVFRL DYKGQPACLA
301: QSPQLHKQMA ICADFERVFE VGAVYRAEDS FTHRHLCEFI GLDVEMAIHK HYSEIMDLVG ELFPFIFNKI NENCQKELEA IRKQYPFQPL KFLPKTLKLT
401: FAEGIQMLKE AGVQADPLGD LNTETERKLG ELVREKYDTE FYILHRYPSA VRPFYTMPCA DDPNYSNSFD VFIRGEEIIS GAQRVHDPEL LTEQAKRFGI
501: DVETIKTYID SFRYGAPPHG GFGVGLERVV MLFCGLNNIR KTSLFSRDPL RLAP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.