Factsheet for HORVU5Hr1G050160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G165200.1	Wheat	cytosol, golgi	98.71	98.71
TraesCS5A01G160100.2	Wheat	cytosol	98.71	98.35
TraesCS5B01G157800.1	Wheat	cytosol	98.9	98.18
Os02t0686400-01	Rice	extracellular	90.81	89.98
KXG31524	Sorghum	cytosol	87.68	87.2
Zm00001d008975_P002	Maize	cytosol	86.95	86.79
Zm00001d015168_P001	Maize	extracellular, plasma membrane	86.76	86.45
HORVU7Hr1G107410.1	Barley	cytosol	81.25	82.0
CDX73541	Canola	cytosol	26.65	69.38
VIT_04s0008g03010.t01	Wine grape	cytosol	68.2	68.2
KRH15638	Soybean	nucleus	68.01	68.14
KRH05378	Soybean	nucleus	68.01	68.01
HORVU6Hr1G022660.15	Barley	cytosol	50.0	68.0
HORVU5Hr1G083090.1	Barley	cytosol, plastid	68.2	67.7
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	48.9	67.17
Solyc05g056250.2.1	Tomato	plastid	66.91	66.91
HORVU4Hr1G090760.1	Barley	cytosol	47.43	64.02
CDY28248	Canola	cytosol	64.52	63.93
CDX68726	Canola	extracellular	64.52	63.93
Bra011251.1-P	Field mustard	cytosol	64.34	63.75
AT4G31180.1	Thale cress	cytosol	64.52	62.9
CDY35247	Canola	cytosol	59.19	60.87
CDY13418	Canola	cytosol	61.4	60.51
Bra024018.1-P	Field mustard	cytosol	61.4	60.51
CDX78190	Canola	cytosol	19.49	60.23
Bra007014.1-P	Field mustard	cytosol	19.49	60.23
AT4G26870.1	Thale cress	cytosol	58.64	59.96
CDX72297	Canola	cytosol	60.85	59.75
CDY14727	Canola	cytosol	58.82	59.59
GSMUA_Achr10P...	Banana	cytosol	14.15	52.74
CDY06845	Canola	nucleus	45.4	48.72
HORVU1Hr1G024420.4	Barley	mitochondrion	33.46	41.74
HORVU2Hr1G049240.1	Barley	mitochondrion	20.4	20.75
HORVU1Hr1G021130.2	Barley	plastid	20.77	19.96
Bra011081.1-P	Field mustard	cytosol	56.43	17.34

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	EMBL:AK367903	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
ncoils:Coil	UniProt:F2DVI5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812
GO:GO:0004815	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G050160	EnsemblPlants:HORVU5Hr1G050160.1
InterPro:IPR006195	HAMAP:MF_02075	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862
PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00458	UniParc:UPI000200726E
InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DVI5]

Coordinates

chrchr5H:+:388730361..388736731

Molecular Weight (calculated)

60781.8 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.316

Length

544 amino acids

Sequence
(BLAST)

001: MSSEPAPASA STEELEADLS AATISKKQLK KDARKAEKAG KASQRQQQQQ PQAEEADPFA ANYGDVPVEE IQSKVISGRT WTDIGDLDEA AAGRSVLIRG
101: SAQTLRPVSK KMAFVVLRQS MSTVQCVLVA SPDAGVSTQM VRFATSLSKE SIVDVEGIVT LPKEPLKATT QQVEIQVRKV YCINRAIPTL PINLEDAARS
201: EAEFDKAEQN GEKLVRVLQD TRLNYRAIDL RTPANQAIFR IQCHVENKFR EFLFSENFIG IHSPKLIGGS SEGGASVFKL EYNGQPACLA QSPQLYKQMS
301: ICGGFGRVFE VGPVFRAEKS NTHRHLCEFI GLDAEMEIKE HYFEVCDIID GLFVAIFKHL NENCQKELET INRQYPFEPL KYLEKTLKLT YEEGIKMLKE
401: AGTEIEPMGD LNTEAEKKLG RLVKEKYGTE FFILYRYPLA VRPFYTMPCY DDPAYSNSFD VFIRGEEIIS GAQRIHTPEL LRKRAIECGI DASTIASYIE
501: SFSYGAPPHG GFGVGLERVV MLFCALNNIR KTSLFPRDPQ RLAP

Best Arabidopsis Sequence Match ( AT4G31180.2 )
(BLAST)

001: MSSESEIPPL SSSTAAAEES GEKTSKKAAK KEAAKLEKLR RRQEQEEATR RTASISLEEN DEFSNNYGDV TLTELQSSAD PKAGKWIEAV EGKEWTDVSD
101: LVEEMLESEV LIRGRVHTNR PTSNKLGFVV LRESGSTVQC VVSQSEKTKV GANMVKYLKQ LSRESFVDVI GVVTLPKEPL TGTTQQVEIQ VRKVYCINKS
201: LAKLPLSVED AARSEADIEA SLQTPSPAAR VNQDTRLNYR VLDLRTPANQ AIFQLQYEVE YAFREKLRFK NFVGIHTPKL MAGSSEGGSA VFRLEYKGQP
301: ACLAQSPQLH KQMAICGDLR RVFEVGPVFR AEDSFTHRHL CEFVGLDVEM EIRKHYSEIM DLVDELFVFI FTSLNERCKK ELQAVGKQYP FEPLKFLPKT
401: LRLTFEEGVQ MLKEAGVEVD PLGDLNTESE RKLGQLVLEK YNTEFYILHR YPKAVRPFYT MTCADNPLYS NSFDVFIRGE EIISGAQRVH IPEVLEQRAG
501: ECGIDVKTIS TYIDSFRYGA PLHGGFGVGL ERVVMLFCAL NNIRKTSLFP RDPQRLSP

Arabidopsis Description

IBI1Aspartate--tRNA ligase 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q9M084]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.