CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35247	Canola	cytosol	79.09	75.8
CDY14727	Canola	cytosol	75.74	71.51
AT4G26870.1	Thale cress	cytosol	74.36	70.86
CDX68726	Canola	extracellular	64.5	59.56
CDY28248	Canola	cytosol	64.3	59.38
CDY13418	Canola	cytosol	60.35	55.43
CDX72297	Canola	cytosol	59.37	54.33
Os02t0139600-01	Rice	cytosol	37.08	53.26
GSMUA_Achr3P05380_001	Banana	cytosol	41.03	51.36
CDX78190	Canola	cytosol	17.75	51.14
Solyc05g056250.2.1	Tomato	plastid	53.06	49.45
TraesCS7B01G222700.1	Wheat	cytosol	30.57	49.36
CDX73541	Canola	cytosol	20.12	48.8
KRH15638	Soybean	nucleus	51.68	48.25
VIT_04s0008g03010.t01	Wine grape	cytosol	51.68	48.16
KRH05378	Soybean	nucleus	51.68	48.16
Zm00001d008975_P002	Maize	cytosol	49.9	46.42
Os02t0686400-01	Rice	extracellular	50.1	46.27
KXG31524	Sorghum	cytosol	49.7	46.07
Zm00001d015168_P001	Maize	extracellular, plasma membrane	49.51	45.97
TraesCS5D01G165200.1	Wheat	cytosol, golgi	49.11	45.77
TraesCS5A01G160100.2	Wheat	cytosol	49.11	45.6
TraesCS5B01G157800.1	Wheat	cytosol	49.11	45.44
HORVU5Hr1G050160.1	Barley	cytosol	48.72	45.4
HORVU6Hr1G022660.15	Barley	cytosol	35.11	44.5
HORVU7Hr1G107410.1	Barley	cytosol	45.56	42.86
GSMUA_Achr10P...	Banana	cytosol	12.23	42.47
OQU84347	Sorghum	cytosol	41.62	42.45
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	32.94	42.17
HORVU4Hr1G090760.1	Barley	cytosol	33.14	41.69
HORVU5Hr1G083090.1	Barley	cytosol, plastid	44.38	41.06
TraesCS5D01G333800.2	Wheat	cytosol	44.97	41.01
TraesCS5B01G327800.1	Wheat	cytosol, plastid	43.79	40.36
TraesCS5A01G327900.1	Wheat	cytosol	43.0	39.42
TraesCS1A01G111100.1	Wheat	cytosol	33.33	31.83
HORVU1Hr1G024420.4	Barley	mitochondrion	22.88	26.61
CDY42212	Canola	cytosol	19.33	17.25
CDY53991	Canola	cytosol	18.15	17.1
CDY11908	Canola	plastid	19.13	16.87
CDX88584	Canola	cytosol	17.55	16.82
CDY32876	Canola	cytosol, extracellular	18.93	16.7
CDY32766	Canola	cytosol	18.93	16.7
CDY50134	Canola	plastid	16.96	15.3
CDY58174	Canola	plastid	16.96	15.3
CDY35583	Canola	plastid	16.77	15.18
CDY42978	Canola	plastid	16.77	15.1
CDY38272	Canola	cytosol	13.61	14.5
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	13.81	14.03
CDX74047	Canola	cytosol	14.6	11.88
CDY07998	Canola	cytosol	14.4	11.85
CDY28051	Canola	cytosol	14.4	11.53
CDY35930	Canola	cytosol	14.4	11.51
CDY08000	Canola	cytosol	1.97	6.45

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	GO:A0A078EXM8	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb
EnsemblPlants:CDY06845	ProteinID:CDY06845	ProteinID:CDY06845.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00123113001	InterPro:IPR006195	InterPro:NA-bd_OB-fold	InterPro:NA-bd_OB_tRNA	PFAM:PF00152
PFAM:PF01336	PRINTS:PR01042	PFscan:PS50862	PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681
UniParc:UPI0004EE32BA	InterPro:aa-tRNA-synt_II	InterPro:aa-tRNA-synth_II	SEG:seg	:	:

Description

BnaC01g09440D

Coordinates

chrLK031973:-:756156..758449

Molecular Weight (calculated)

57409.1 Da

IEP (calculated)

7.934

GRAVY (calculated)

-0.364

Length

507 amino acids

Sequence
(BLAST)

001: MSSSNEEKMS KKAAKKRAAK LEKLSRKQER EEATSSSLPL PLEEEDESFS SNYGDVTPKS AAEAVEGKEL TEVSNLVEEI VGSEVSIRGR VHDHRLVGKK
101: LFVILRQSEF RVQCVVEEAR VGTSMLKFVK QLSHESVVEL IGVVSLPKKP LTGTTQQVEI HVTKMYCLSR SSLNLPLLVE DAARSEADIE KSVKVGKPAA
201: RVLQDTRFNN RFLDLRTPAN QALFRIQCHV QIAFREFLLS KGFLEIHTPK LIAGSSEGGS AVFRLDYKGQ PACLAQSPQL HKQMAICGDM RRVFEVGPVF
301: RAEDSFTHRH LCEFVGLDVE MEIRMHYSEI MDLVGDLFPF IFTKIEERCP KELETVRKQY PFQSLKFLPQ TLRLTFAQGI QMLKEAGEEV DPLGDLNTES
401: ERKLGQLVWK KSRQSSTCCI AIHRLSDRST RCHVKTILTT ATHSMSSSEE RRSCQELNVS MTQNSWRSVQ ENAALMSRQY PHTSMHSGMV HHLTVDLEWG
501: WSVWLAP

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.