Factsheet for TraesCS1A01G111100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G024420.4	Barley	mitochondrion	54.8	66.74
CDX73541	Canola	cytosol	20.53	52.15
TraesCS5A01G160100.2	Wheat	cytosol	47.46	46.15
TraesCS5A01G327900.1	Wheat	cytosol	46.7	44.85
OQU84347	Sorghum	cytosol	41.62	44.47
VIT_04s0008g03010.t01	Wine grape	cytosol	44.44	43.38
KRH15638	Soybean	nucleus	44.26	43.28
Os02t0139600-01	Rice	cytosol	28.63	43.06
Solyc05g056250.2.1	Tomato	plastid	44.07	43.01
KRH05378	Soybean	nucleus	44.07	43.01
CDY35247	Canola	cytosol	42.75	42.91
CDY14727	Canola	cytosol	42.0	41.53
AT4G26870.1	Thale cress	cytosol	41.43	41.35
CDX68726	Canola	extracellular	42.56	41.17
CDY28248	Canola	cytosol	42.37	40.98
Bra011251.1-P	Field mustard	cytosol	42.37	40.98
Bra024018.1-P	Field mustard	cytosol	41.24	39.67
CDY13418	Canola	cytosol	41.24	39.67
AT4G31180.1	Thale cress	cytosol	41.43	39.43
CDX72297	Canola	cytosol	41.05	39.35
CDX78190	Canola	cytosol	12.99	39.2
Bra007014.1-P	Field mustard	cytosol	12.99	39.2
CDY06845	Canola	nucleus	31.83	33.33
TraesCS2A01G231500.2	Wheat	cytosol	18.27	22.88
TraesCS7A01G031700.1	Wheat	cytosol	20.53	21.29
TraesCS2A01G584300.1	Wheat	cytosol	20.72	19.78
TraesCS1A01G102600.1	Wheat	golgi	20.34	19.08
Bra011081.1-P	Field mustard	cytosol	39.92	11.98

Protein Annotations

MapMan:17.2.4	Gene3D:2.40.50.140	Gene3D:3.30.930.10	InterPro:Asp-tRNA_synthase_2	InterPro:Asp/Asn-tRNA-synth_IIb	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412
GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR006195	InterPro:NA-bd_OB-fold	PFAM:PF00152	PRINTS:PR01042	PFscan:PS50862
PANTHER:PTHR43450	SUPFAM:SSF50249	SUPFAM:SSF55681	EnsemblPlantsGene:TraesCS1A01G111100	EnsemblPlants:TraesCS1A01G111100.1	InterPro:aa-tRNA-synt_II
InterPro:aa-tRNA-synth_II	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:111534404..111538208

Molecular Weight (calculated)

59705.2 Da

IEP (calculated)

7.774

GRAVY (calculated)

-0.220

Length

531 amino acids

Sequence
(BLAST)

001: MLGKKGEGTP TAAPDAKNPY LKQPAGENAV GSRTASADET SDGEQLLSLS EALYSKSYGD VPVEVFMTVP VRRPLDRLNL ADISREAAGR IVLVQGFAQT
101: IKKVNKNITL VVLREGLSSI KCVVLADDPG ICEDMVTFIR KLNKESFVEV EGLIETMRGT QQIRVKKLYC IDEAGGLPFQ LEDAARGAHK QFDTQGKKLA
201: HVSLSVRLNS RFFDLRIRVS QAVFWIQSEV TTHFMQFMIK GGFMCTHTPK ITGVSEGGSA VFKVNYFKEQ ASLAQSPQLY KQMLINGGIN RVFEVGPVYR
301: AEDSNTHRHL CEYIGLHAEM QIKEHYFEVI DFVDALFVDL FDHLAKNCSE MLDIIQEQYP CERLKYLQQN VRLKYSDGIK MLQESGFPIQ EPQDLNNKAE
401: LMLGKLVLEK YKTDFFILYE FPLAVRPFYT MPSGQERNPG SYSNSFDAYI RGQEVLSGSQ RIHNKSLLIK RIDERGYIKA IFQQFTDTFG CGAPPRGGFG
501: AGLERLVMLY LGVPDIRIAS LFPRDPGRLV P

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.