CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78190	Canola	cytosol	49.76	59.09
GSMUA_Achr10P...	Banana	cytosol	28.71	41.1
GSMUA_Achr3P05380_001	Banana	cytosol	72.25	37.28
AT4G31180.1	Thale cress	cytosol	86.12	32.26
Solyc05g056250.2.1	Tomato	plastid	80.38	30.88
CDY35247	Canola	cytosol	77.03	30.43
CDY14727	Canola	cytosol	76.08	29.61
VIT_04s0008g03010.t01	Wine grape	cytosol	75.6	29.04
CDX68726	Canola	extracellular	75.6	28.78
CDY28248	Canola	cytosol	75.6	28.78
CDY13418	Canola	cytosol	75.12	28.44
KRH15638	Soybean	nucleus	73.68	28.36
KRH05378	Soybean	nucleus	73.68	28.31
CDX72297	Canola	cytosol	73.68	27.8
OQU84347	Sorghum	cytosol	66.03	27.77
Os02t0686400-01	Rice	extracellular	71.77	27.32
Zm00001d015168_P001	Maize	extracellular, plasma membrane	70.33	26.92
KXG31524	Sorghum	cytosol	70.33	26.87
HORVU5Hr1G050160.1	Barley	cytosol	69.38	26.65
TraesCS5D01G165200.1	Wheat	cytosol, golgi	69.38	26.65
Zm00001d008975_P002	Maize	cytosol	69.38	26.61
TraesCS5A01G160100.2	Wheat	cytosol	69.38	26.56
TraesCS5A01G327900.1	Wheat	cytosol	69.86	26.4
TraesCS5B01G157800.1	Wheat	cytosol	68.9	26.28
TraesCS5D01G333800.2	Wheat	cytosol	69.86	26.26
TraesCS5B01G327800.1	Wheat	cytosol, plastid	68.9	26.18
HORVU5Hr1G083090.1	Barley	cytosol, plastid	67.94	25.91
HORVU7Hr1G107410.1	Barley	cytosol	66.51	25.79
HORVU1Hr1G024420.4	Barley	mitochondrion	51.67	24.77
TraesCS1A01G111100.1	Wheat	cytosol	52.15	20.53
CDY06845	Canola	nucleus	48.8	20.12
Os02t0139600-01	Rice	cytosol	29.67	17.56
HORVU7Hr1G011750.7	Barley	cytosol, mitochondrion, nucleus	27.27	14.39
CDY08000	Canola	cytosol	10.05	13.55
HORVU6Hr1G022660.15	Barley	cytosol	25.36	13.25
HORVU4Hr1G090760.1	Barley	cytosol	24.4	12.66
CDY53991	Canola	cytosol	27.27	10.59
CDX88584	Canola	cytosol	25.84	10.21
CDY42212	Canola	cytosol	27.27	10.04
CDY32876	Canola	cytosol, extracellular	26.32	9.57
CDY32766	Canola	cytosol	26.32	9.57
CDY11908	Canola	plastid	26.32	9.57
CDY52736	Canola	endoplasmic reticulum, plastid, vacuole	21.53	9.02
CDY35583	Canola	plastid	22.97	8.57
CDY50134	Canola	plastid	22.97	8.54
CDY58174	Canola	plastid	22.97	8.54
CDY42978	Canola	plastid	22.49	8.35
CDX74047	Canola	cytosol	22.01	7.38
CDY07998	Canola	cytosol	21.53	7.31
CDY28051	Canola	cytosol	22.01	7.27
CDY38272	Canola	cytosol	16.27	7.14
CDY35930	Canola	cytosol	21.53	7.1
TraesCS7B01G222700.1	Wheat	cytosol	4.78	3.18

Protein Annotations

MapMan:17.2.4	Gene3D:3.30.930.10	GO:A0A078C926	InterPro:Asp-tRNA_synthase_2	EnsemblPlants:CDX73541	ProteinID:CDX73541
ProteinID:CDX73541.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0004815
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006139	GO:GO:0006412	GO:GO:0006418	GO:GO:0006422	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00109071001	InterPro:IPR006195	PFAM:PF00152
PFscan:PS50862	PANTHER:PTHR43450	PANTHER:PTHR43450:SF1	SUPFAM:SSF55681	UniParc:UPI0004EF2173	InterPro:aa-tRNA-synt_II
InterPro:aa-tRNA-synth_II	:	:	:	:	:

Description

BnaC08g24620D

Coordinates

chrLK031799:+:1068599..1070346

Molecular Weight (calculated)

24309.4 Da

IEP (calculated)

5.649

GRAVY (calculated)

-0.205

Length

209 amino acids

Sequence
(BLAST)

001: MAICGDLRRV FVVGPVFRAE DSFTHRHLCE FVGLDAEMEI YKDYSEIMDL VDELFVFMFT ELNEKCKKEL EAVGKQYPFE PLKEAGVEVD PLGDLNTESE
101: RKLGQLVLEK YKTEFYILHR FPTAVRPFYT MPCADNPLYS NSFDVFIRGE EIMSGGQHNI HIHLFIQVRS ASTRWIRSFG LERVVMLFCA QNNIRKTSLL
201: PRDPQRLSP

Best Arabidopsis Sequence Match ( AT4G26870.1 )
(BLAST)

001: MVGSEVLEEC GEKISKKESK KRAAKLEKLL RKQEREEATS SSLSLEEEDE SCSSNYGDVT TNELQSAVEG KELTDVSNLV EEIVGSEVSI RGRLHKNRLV
101: GTKLFVILRE SGFTVQCVVE ETRVGANMIK FVKQLSRESV VELIGVVSHP KKPLTGTTQQ VEIHVRKMYC LSRSLPNLPL VVEDAARSES DIEKSGKDGK
201: QAARVLQDTR LNNRVLDIRT PANQAIFRIQ CQVQIAFREY LQSKGFLEIH TPKLIAGSSE GGSAVFRLDY KGQPACLAQS PQLHKQMAIC GDMRRVFEVG
301: PVFRAEDSFT HRHLCEFVGL DVEMEIRMHY SEIMDLVGEL FPFIFTKIEE RCPKELESVR KQYPFQSLKF LPQTLRLTFA EGIQMLKEAG EEVDPLGDLN
401: TESERKLGQL VLEKYKTEFY MLHRYPSAVR PFYTMPYEND SNYSNSFDVF IRGEEIMSGA QRIHDPELLE KRARECGIDV KTISTYIDAF RYGAPPHGGF
501: GVGLERVVML LCALNNIRKT SLFPRDSQRL TP

Arabidopsis Description

Aspartate--tRNA ligase 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q8H104]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.