Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 2
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0004g07580.t01 Wine grape cytosol 32.04 58.22
AT1G68420.1 Thale cress cytosol 12.66 56.32
VIT_12s0034g00320.t01 Wine grape cytosol 42.89 55.33
VIT_06s0004g07600.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 33.85 54.13
VIT_06s0080g00530.t01 Wine grape cytosol, mitochondrion, peroxisome, plastid 33.85 54.13
EER95098 Sorghum cytosol 76.23 52.58
EER90985 Sorghum cytosol 75.97 52.41
Zm00001d009271_P003 Maize cytosol 75.71 52.14
Os01t0372700-01 Rice plastid 74.68 51.7
TraesCS1A01G102600.1 Wheat golgi 74.16 50.71
HORVU1Hr1G021130.2 Barley plastid 74.16 50.71
TraesCS7D01G028100.1 Wheat cytosol 66.41 50.69
TraesCS1D01G094600.1 Wheat cytosol 73.9 50.53
TraesCS1B01G113400.1 Wheat cytosol 73.9 50.53
KRH60164 Soybean endoplasmic reticulum 73.64 50.26
VIT_11s0016g02680.t01 Wine grape cytosol 74.16 50.26
TraesCS7A01G031700.1 Wheat cytosol 66.41 50.2
KRH41453 Soybean cytosol, extracellular, nucleus 73.39 50.09
Bra006861.1-P Field mustard cytosol 70.8 49.37
AT5G56680.1 Thale cress cytosol 72.35 48.95
CDX88584 Canola cytosol 66.67 48.77
PGSC0003DMT400060831 Potato cytosol, extracellular 71.83 47.93
Solyc10g080710.1.1 Tomato cytosol, nucleus, unclear 71.83 47.93
CDY11908 Canola plastid 71.06 47.83
Bra002799.1-P Field mustard cytosol 70.03 47.13
CDY32876 Canola cytosol, extracellular 70.03 47.13
CDY32766 Canola cytosol 70.03 47.13
AT1G70980.1 Thale cress cytosol 69.51 47.11
TraesCS2A01G584300.1 Wheat cytosol 67.44 46.94
CDY53991 Canola cytosol 63.57 45.72
CDY42212 Canola cytosol 64.86 44.19
CDY52736 Canola endoplasmic reticulum, plastid, vacuole 44.44 34.47
VIT_16s0013g00080.t01 Wine grape cytosol 54.78 34.19
Bra002754.1-P Field mustard cytosol 51.94 33.67
GSMUA_Achr8P31970_001 Banana mitochondrion 42.64 32.48
CDY38272 Canola cytosol 38.24 31.09
GSMUA_AchrUn_... Banana cytosol 42.64 29.26
VIT_00s0120g00100.t01 Wine grape cytosol 32.56 27.16
GSMUA_Achr2P18500_001 Banana plasma membrane 54.78 25.57
KRH38090 Soybean cytosol 16.02 25.1
GSMUA_Achr3P05380_001 Banana cytosol 23.51 22.47
GSMUA_Achr10P... Banana cytosol 6.72 17.81
GSMUA_Achr6P19300_001 Banana cytosol 3.88 8.98
Protein Annotations
KEGG:00970+6.1.1.22MapMan:17.2.3Gene3D:3.30.930.10InterPro:Asn-tRNA-ligaseInterPro:Asp/Asn-tRNA-synth_IIbGO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004812GO:GO:0004816GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006412
GO:GO:0006418GO:GO:0006421GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0019538EnsemblPlantsGene:GSMUA_Achr6G19310_001EnsemblPlants:GSMUA_Achr6P19310_001EnsemblPlants:GSMUA_Achr6T19310_001
InterPro:IPR006195UniProt:M0T8C9PFAM:PF00152PRINTS:PR01042PFscan:PS50862PANTHER:PTHR22594
PANTHER:PTHR22594:SF44SUPFAM:SSF55681TIGRFAMs:TIGR00457TMHMM:TMhelixUniParc:UPI000296295CInterPro:aa-tRNA-synt_II
InterPro:aa-tRNA-synth_IISEG:seg::::
Description
Asparaginyl-tRNA synthetase, cytoplasmic 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G19310_001]
Coordinates
chr6:+:13573995..13576500
Molecular Weight (calculated)
44418.4 Da
IEP (calculated)
5.002
GRAVY (calculated)
-0.037
Length
387 amino acids
Sequence
(BLAST)
001: MVDDHMLHVG YFIVCLPDLA VSSCFCCFAF FIIMRNFLLI YKGLQISAVA RIRDELAYAT HTFFRKNGFR YVHTPIITTS DCEGAGEMFQ VTTLFRETVS
101: QLKSSKASEE EISASIDYAG DFFGRQAFLT VSGQLQVETY ACALGNVYTF GPTFRAENSH TTRHLAEFWM VEPEIAFANL EDDMNYAESY VKFLCQWLLD
201: NCIEDMEFLK TFDEAAIERL KLVSSSPFER ISYTKAVQLL KNVTDKEFAI EVEWGIDLAS EHERYLTEVL FKKPVIVYNY PKGIKAFYMK LNDDQKTVAA
301: MDVLVPKVGE LIGGSQREER LDVLVKRIKE SGLPLEPYEW YLDLRRYGTV KHSGFGLGFE RMILFATGME NIRDVIPFPR YPGRADL
Best Arabidopsis Sequence Match ( AT5G56680.1 )
(BLAST)
001: MADEIVPPAT QLAAVSLEND GSTVQRAQFS NRVLIRTILD RPDGGAGLAG QTVRIGGWVK SGRDQGKRTF SFLAVNDGSC PANLQVMVDP SLYDVSNLVA
101: TGTCVTVDGV LKVPPKGKGT QQQIELNVVK VIDVGTVDAS KYPLPKTKLT LETLRDVLHL RSRTNSISAV ARIRNALAFA THSFFQEHSF LYIHTPIITT
201: SDCEGAGEMF QATTLINYTE RLEQDLIDNP PPTEADVEAA RLIVIERGNV VAELKAAKAS KEAITAAVAE LKIAKETFAH IDERSRLRPG LPKKDGNIDY
301: SKDFFGRQAF LTVSGQLQVE TYACALSNVY TFGPTFRAEN SHTSRHLAEF WMVEPEIAFA DLEDDMNCAE AYVKYMCNWL LEKCYADMEL MAKNFDSGCI
401: DRLKLVASTP FGRITYTKAI ELLEEAVAKG KEFDNNVEWG IDLASEHERY LTEVLFQKPL IVYNYPKGIK AFYMRLNDDE KTVAAMDVLV PKVGELIGGS
501: QREERYDVIK KRIEEMGLPI EPYEWYLDLR RYGTVKHCGF GLGFERMILF ATGLDNIRDV IPFPRYPGKA DL
Arabidopsis Description
SYNC1Asparagine--tRNA ligase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW96]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.