Factsheet for GSMUA_AchrUn_randomP02460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31970_001	Banana	mitochondrion	58.69	65.16
VIT_07s0141g00940.t01	Wine grape	cytosol, extracellular, plastid	14.54	56.55
CDY08000	Canola	cytosol	14.01	50.97
VIT_00s2558g00010.t01	Wine grape	cytosol	22.34	46.67
PGSC0003DMT400056710	Potato	cytosol	48.05	44.65
Solyc09g057950.2.1	Tomato	cytosol	46.1	42.69
GSMUA_Achr6P19310_001	Banana	endoplasmic reticulum	29.26	42.64
CDY07998	Canola	cytosol	45.92	42.05
CDX74047	Canola	cytosol	46.1	41.73
Bra001250.1-P	Field mustard	cytosol	45.92	41.57
Os12t0414500-01	Rice	plasma membrane	45.21	41.46
CDY28051	Canola	cytosol	46.1	41.07
KRH07367	Soybean	cytosol	45.21	40.87
AT3G07420.1	Thale cress	cytosol	45.74	40.44
Bra029647.1-P	Field mustard	cytosol	45.39	40.38
CDY35930	Canola	cytosol	45.04	40.06
KRH66191	Soybean	plastid	44.68	39.44
GSMUA_Achr6P19300_001	Banana	cytosol	11.17	37.72
GSMUA_Achr2P18500_001	Banana	plasma membrane	34.93	23.76
GSMUA_Achr3P05380_001	Banana	cytosol	14.72	20.49
GSMUA_Achr10P...	Banana	cytosol	4.61	17.81

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	InterPro:Asn-tRNA-ligase	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006421	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSMUA_AchrUn_randomG02460_001	EnsemblPlants:GSMUA_AchrUn_randomP02460_001	EnsemblPlants:GSMUA_AchrUn_randomT02460_001	UniProt:M0U5Q8	PFAM:PF00152	PANTHER:PTHR22594
PANTHER:PTHR22594:SF36	SUPFAM:SSF55681	TIGRFAMs:TIGR00457	UniParc:UPI000296FBB8	InterPro:aa-tRNA-synt_II	SEG:seg

Description

Putative Asparaginyl-tRNA synthetase, cytoplasmic 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG02460_001]

Coordinates

chrchrUn_random:+:11863515..11866659

Molecular Weight (calculated)

62297.9 Da

IEP (calculated)

7.869

GRAVY (calculated)

-0.240

Length

564 amino acids

Sequence
(BLAST)

001: MASRETTVSD GSNQPEAPPP PAVEPSKYSK TTALKSILNR DDKGLGLVGQ RVVVGGWKPA ASPAKDGPFT VYLRINDGSC SSNLQVVMDS SMSLPGQVIT
101: VGTSILVQGM LQKILAPKKH VVELIVENIL HVGVVDVKSY PLTKPRISLV SLRDHPHLRP RSIAIGSVTR ICSNLIYTGH GFFHKKGFIH VQTPIITSMN
201: AGNHGKMFQV TTLLSNSGGK DKSAAVHEHE GVDLEAFRAA ISEKSKRIDE LRRSDSNKEA LSAAEQDLQR SKELVLMLEK QQQSTAPSAG ELDFSNDFFS
301: RPVYLSASAG LHLESYACGL SSVYTIGPVF QTDESKSAEK LAEMWMIEAE LAFTELQDVM NCAEDLVQSL CYSLMETAGN DLKCVSKQIE KNCIKRLKSI
401: VSGSFARITY SEALNILNQV KDKSFLSKVG WGNTLSEEQE SYLADEFYRR PVIVYEYPKE VKPFYVRVSD DGRTVSAFDI IAPKVGVMVR GSQKEERMDV
501: IVKRIQELGL PHEQYEWYID LRKHGSVKHS GFSLDIEKMV MTATGLADVK DAIPFPRVRG HAKL

Best Arabidopsis Sequence Match ( AT3G07420.1 )
(BLAST)

001: MESHGKTHQK EHDNDLSPKP ITLSKYSKRV ELKTLLDRSD RGAGLAGKRV VIGGWVKSAR AVKKNSPPPP LPVVAAPSPS SGGDQAHTTA NIRCTEIIQS
101: KMNIFKRFFD VLSGGGKTYP IFDKTELAGQ KAVPPPEYVF YFLISDGSSI SSLQVVVDSA LSTVPATQLM ALGTCIVAEG VLRLPLAASA KHVIELEAEK
201: LLHVGTVDPE KYPLSKKQLP LHMLRDFSHF RPRTTTVGSV TRVHSALTLA SHTFLQYHGF QYVQVPVITT TTGFGEMFRV TTLLGKTDDK EEKKPPVQEK
301: DGFSIDTVKA VIKEKTRLID HLKRSDSNRE TVVAAVHDLK KTNDLASQIE MKQKSKTGTL VKPEKLDFSK DFFGRDTYLT ASGRFHLESY ASALGKVYTF
401: GPRFIADKID NARHLAEKWN VETEMAFAEL DDAMDCADEY FKFLCKYVLE NRDEDMKFIS KRVDKTITTR LEATASSSLL RFSYTEVISL LQKATTTKFE
501: TKPEWGVALT TEHLSYLTDE IYKGPVIVHT YPKAIKQFYV RLNDDKKTVA AFDLVVPKVG VVITGSQNEE RFEILDARIG ESGFTREKFE WYLDLRRHGT
601: VKHSGISLSM EQMLLYATGL PDIKDAIPFP RSWGKANN

Arabidopsis Description

SYNC2SYNC2_ARATH [Source:UniProtKB/TrEMBL;Acc:A0A178VCZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.