CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07367	Soybean	cytosol	88.26	90.38
VIT_07s0141g00940.t01	Wine grape	cytosol, extracellular, plastid	15.65	68.97
VIT_00s2558g00010.t01	Wine grape	cytosol	26.92	63.7
CDY08000	Canola	cytosol	13.77	56.77
PGSC0003DMT400056710	Potato	cytosol	51.49	54.2
Solyc09g057950.2.1	Tomato	cytosol	50.7	53.2
CDY07998	Canola	cytosol	50.08	51.95
CDY28051	Canola	cytosol	50.55	51.03
Bra001250.1-P	Field mustard	cytosol	49.61	50.88
CDY35930	Canola	cytosol	50.39	50.79
Bra029647.1-P	Field mustard	cytosol	50.39	50.79
CDX74047	Canola	cytosol	49.3	50.56
AT3G07420.1	Thale cress	cytosol	50.08	50.16
KRH60164	Soybean	endoplasmic reticulum	40.06	45.15
GSMUA_AchrUn_...	Banana	cytosol	39.44	44.68
KRH41453	Soybean	cytosol, extracellular, nucleus	39.59	44.62
GSMUA_Achr8P31970_001	Banana	mitochondrion	34.59	43.5
Os12t0414500-01	Rice	plasma membrane	38.97	40.49
KRH04132	Soybean	plastid	30.67	35.64
KRH57405	Soybean	plastid	30.36	35.21
KRH38090	Soybean	cytosol	13.3	34.41
KRH15638	Soybean	nucleus	14.87	17.5
KRH05378	Soybean	nucleus	14.71	17.28

Protein Annotations

EntrezGene:100787363	MapMan:17.2.3	EMBL:ACUP02001920	ncoils:Coil	EnsemblPlantsGene:GLYMA_03G089300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004812	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0006412	GO:GO:0006418	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	UniProt:K7KDX4	EnsemblPlants:KRH66191	ProteinID:KRH66191	ProteinID:KRH66191.1	PFAM:PF00152
PANTHER:PTHR22594	PANTHER:PTHR22594:SF36	SUPFAM:SSF55681	UniParc:UPI00023C10C8	InterPro:aa-tRNA-synt_II	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:26581924..26588048

Molecular Weight (calculated)

71314.5 Da

IEP (calculated)

8.630

GRAVY (calculated)

-0.300

Length

639 amino acids

Sequence
(BLAST)

001: MAAAKTTTTS AQQTSSAPLR LDAPRIPPLA YSGRVQLKAL LDRPESVVGR HVIVGGWVKS AKEVKKKAAA PPSFATATEE TTDAGEGGKG KDVSCVEILQ
101: SRIPLLRSLL DVFGGGGYVQ RKKRENVIVP NHKVLPPKAS TAYLLLTDGS CVPSLQVVVD SSVATPSRLL PTGTCLLVEG QLERAEGKHA IELKAEKVLH
201: IGTVDFDKYP LSKKRIPLDT LRDYSQFRPR TTTVATVVRI RSSLSFATHT FFNEHAFIDV QVPIITSTDS EGFSNMLKVN TLEQKAEKEK LDTIYETEGV
301: SLEHVKAAAK EKSNIIEHLK RTESNREALA AAVQDLRKTN ELASQMEARE KRKLGASFKD DDKVDSSKEF FPFQTYLTVS GRLHLESYAC ALGNVYSFGP
401: RFLADKTDSA KHAAEMWMVE VEMAFSLLKD SMNCANDFFK YLCNWVLIHC SEEMKFVAKR IDNTCVNRLQ QIILGSPVMM TYHEAIDVLR KLSYQAEDKK
501: FETNFESGFA LTSEHLSYLT DTIYQKPVVI YNYPKEAKPF YARQNDDGTV AAFDLVVPKL GTIISGSQNE ERLNMISSRI DELGLPREKY EWYLDLRRNG
601: TVKNSGFTLR FDLMVLFATG LGNVRDVIPF PRSYGKANN

Best Arabidopsis Sequence Match ( AT3G07420.1 )
(BLAST)

001: MESHGKTHQK EHDNDLSPKP ITLSKYSKRV ELKTLLDRSD RGAGLAGKRV VIGGWVKSAR AVKKNSPPPP LPVVAAPSPS SGGDQAHTTA NIRCTEIIQS
101: KMNIFKRFFD VLSGGGKTYP IFDKTELAGQ KAVPPPEYVF YFLISDGSSI SSLQVVVDSA LSTVPATQLM ALGTCIVAEG VLRLPLAASA KHVIELEAEK
201: LLHVGTVDPE KYPLSKKQLP LHMLRDFSHF RPRTTTVGSV TRVHSALTLA SHTFLQYHGF QYVQVPVITT TTGFGEMFRV TTLLGKTDDK EEKKPPVQEK
301: DGFSIDTVKA VIKEKTRLID HLKRSDSNRE TVVAAVHDLK KTNDLASQIE MKQKSKTGTL VKPEKLDFSK DFFGRDTYLT ASGRFHLESY ASALGKVYTF
401: GPRFIADKID NARHLAEKWN VETEMAFAEL DDAMDCADEY FKFLCKYVLE NRDEDMKFIS KRVDKTITTR LEATASSSLL RFSYTEVISL LQKATTTKFE
501: TKPEWGVALT TEHLSYLTDE IYKGPVIVHT YPKAIKQFYV RLNDDKKTVA AFDLVVPKVG VVITGSQNEE RFEILDARIG ESGFTREKFE WYLDLRRHGT
601: VKHSGISLSM EQMLLYATGL PDIKDAIPFP RSWGKANN

Arabidopsis Description

SYNC2SYNC2_ARATH [Source:UniProtKB/TrEMBL;Acc:A0A178VCZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.