Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g057950.2.1 | Tomato | cytosol | 94.23 | 93.92 |
| VIT_00s2558g00010.t01 | Wine grape | cytosol | 28.01 | 62.96 |
| VIT_07s0141g00940.t01 | Wine grape | cytosol, extracellular, plastid | 14.83 | 62.07 |
| CDY08000 | Canola | cytosol | 14.5 | 56.77 |
| KRH07367 | Soybean | cytosol | 54.86 | 53.37 |
| KRH66191 | Soybean | plastid | 54.2 | 51.49 |
| CDY28051 | Canola | cytosol | 53.54 | 51.34 |
| CDY07998 | Canola | cytosol | 51.57 | 50.81 |
| Bra029647.1-P | Field mustard | cytosol | 52.88 | 50.63 |
| CDX74047 | Canola | cytosol | 51.89 | 50.56 |
| CDY35930 | Canola | cytosol | 52.72 | 50.47 |
| Bra001250.1-P | Field mustard | cytosol | 51.73 | 50.4 |
| AT3G07420.1 | Thale cress | cytosol | 52.39 | 49.84 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.65 | 48.05 |
| GSMUA_Achr8P31970_001 | Banana | mitochondrion | 37.07 | 44.29 |
| Os12t0414500-01 | Rice | plasma membrane | 42.83 | 42.28 |
| PGSC0003DMT400060831 | Potato | cytosol, extracellular | 38.88 | 40.69 |
| PGSC0003DMT400039341 | Potato | mitochondrion, plastid | 30.81 | 32.75 |
Protein Annotations
| KEGG:00970+6.1.1.22 | EntrezGene:102588775 | MapMan:17.2.3 | InterPro:Asn-tRNA-ligase | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004812 | GO:GO:0004816 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006412 | GO:GO:0006418 | GO:GO:0006421 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0019538 | UniProt:M1BZT7 | PFAM:PF00152 |
| EnsemblPlantsGene:PGSC0003DMG400022055 | PGSC:PGSC0003DMG400022055 | EnsemblPlants:PGSC0003DMT400056710 | PANTHER:PTHR22594 | PANTHER:PTHR22594:SF36 | SUPFAM:SSF55681 |
| TIGRFAMs:TIGR00457 | UniParc:UPI000296D394 | RefSeq:XP_006365265.1 | InterPro:aa-tRNA-synt_II | : | : |
Description
Aspartyl-tRNA synthetase [Source:PGSC_GENE;Acc:PGSC0003DMG400022055]
Coordinates
chr9:+:21404331..21408367
Molecular Weight (calculated)
68280.4 Da
IEP (calculated)
8.963
GRAVY (calculated)
-0.245
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSKQAPVVE CSKYTKRVML KTLFGRSDGE VGLIGQRVVI GGWVKSSREI RKQPVTPHSV PAQVVSTKDV TCSEVLQSRI PLLRSIMKVF GAGEYRVREK
101: INVVFQPQPS VSILQISDGS CVPSLQVLVD SALATPCQVM ATGTCVLIEG MLQQPSLQGK HVVELQAEKI LHLGLVDQSN YPLSKKRLPL ESLRDCSHFR
201: PRTTTVASVM RIHNALTWAT HGFFQDQGFL HVQVPILTST DSEGFSEKFV VTTLLNKGKN YDQISSTENA GVSVEAIRAS IKEKSKKVEE LNRTNSNKEA
301: LFAAQQDLKK TQELVSQLES RQKANSGVTI ETRKFDFSKD FFARQTYLTV SGRLHLESQA CGLGNVYSFG PRFQAVKSES KKSLAETWMV DVEMAFSELE
401: DAMECANDFL KFVCKRISEG YMEDLQFILK RIDKKVMERL QLTLSSSFER ISYAEAIEVL RQVPGKRFQG KIEFGVSLTE EHESYLVDEI YKKPVIIYNH
501: PKGLRPFYVH LNDDGMTVAT FDVVLPKVGT VIRGSQSEER FNVLSSRMEV LGLQKQQYEW YLDLRRHGSV KTSGFSLMLE PLVLYATGLN DVKDVVPFPR
601: SFGRANN
101: INVVFQPQPS VSILQISDGS CVPSLQVLVD SALATPCQVM ATGTCVLIEG MLQQPSLQGK HVVELQAEKI LHLGLVDQSN YPLSKKRLPL ESLRDCSHFR
201: PRTTTVASVM RIHNALTWAT HGFFQDQGFL HVQVPILTST DSEGFSEKFV VTTLLNKGKN YDQISSTENA GVSVEAIRAS IKEKSKKVEE LNRTNSNKEA
301: LFAAQQDLKK TQELVSQLES RQKANSGVTI ETRKFDFSKD FFARQTYLTV SGRLHLESQA CGLGNVYSFG PRFQAVKSES KKSLAETWMV DVEMAFSELE
401: DAMECANDFL KFVCKRISEG YMEDLQFILK RIDKKVMERL QLTLSSSFER ISYAEAIEVL RQVPGKRFQG KIEFGVSLTE EHESYLVDEI YKKPVIIYNH
501: PKGLRPFYVH LNDDGMTVAT FDVVLPKVGT VIRGSQSEER FNVLSSRMEV LGLQKQQYEW YLDLRRHGSV KTSGFSLMLE PLVLYATGLN DVKDVVPFPR
601: SFGRANN
001: MESHGKTHQK EHDNDLSPKP ITLSKYSKRV ELKTLLDRSD RGAGLAGKRV VIGGWVKSAR AVKKNSPPPP LPVVAAPSPS SGGDQAHTTA NIRCTEIIQS
101: KMNIFKRFFD VLSGGGKTYP IFDKTELAGQ KAVPPPEYVF YFLISDGSSI SSLQVVVDSA LSTVPATQLM ALGTCIVAEG VLRLPLAASA KHVIELEAEK
201: LLHVGTVDPE KYPLSKKQLP LHMLRDFSHF RPRTTTVGSV TRVHSALTLA SHTFLQYHGF QYVQVPVITT TTGFGEMFRV TTLLGKTDDK EEKKPPVQEK
301: DGFSIDTVKA VIKEKTRLID HLKRSDSNRE TVVAAVHDLK KTNDLASQIE MKQKSKTGTL VKPEKLDFSK DFFGRDTYLT ASGRFHLESY ASALGKVYTF
401: GPRFIADKID NARHLAEKWN VETEMAFAEL DDAMDCADEY FKFLCKYVLE NRDEDMKFIS KRVDKTITTR LEATASSSLL RFSYTEVISL LQKATTTKFE
501: TKPEWGVALT TEHLSYLTDE IYKGPVIVHT YPKAIKQFYV RLNDDKKTVA AFDLVVPKVG VVITGSQNEE RFEILDARIG ESGFTREKFE WYLDLRRHGT
601: VKHSGISLSM EQMLLYATGL PDIKDAIPFP RSWGKANN
101: KMNIFKRFFD VLSGGGKTYP IFDKTELAGQ KAVPPPEYVF YFLISDGSSI SSLQVVVDSA LSTVPATQLM ALGTCIVAEG VLRLPLAASA KHVIELEAEK
201: LLHVGTVDPE KYPLSKKQLP LHMLRDFSHF RPRTTTVGSV TRVHSALTLA SHTFLQYHGF QYVQVPVITT TTGFGEMFRV TTLLGKTDDK EEKKPPVQEK
301: DGFSIDTVKA VIKEKTRLID HLKRSDSNRE TVVAAVHDLK KTNDLASQIE MKQKSKTGTL VKPEKLDFSK DFFGRDTYLT ASGRFHLESY ASALGKVYTF
401: GPRFIADKID NARHLAEKWN VETEMAFAEL DDAMDCADEY FKFLCKYVLE NRDEDMKFIS KRVDKTITTR LEATASSSLL RFSYTEVISL LQKATTTKFE
501: TKPEWGVALT TEHLSYLTDE IYKGPVIVHT YPKAIKQFYV RLNDDKKTVA AFDLVVPKVG VVITGSQNEE RFEILDARIG ESGFTREKFE WYLDLRRHGT
601: VKHSGISLSM EQMLLYATGL PDIKDAIPFP RSWGKANN
Arabidopsis Description
SYNC2SYNC2_ARATH [Source:UniProtKB/TrEMBL;Acc:A0A178VCZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.