Factsheet for GSMUA_Achr8P31970_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	65.16	58.69
VIT_07s0141g00940.t01	Wine grape	cytosol, extracellular, plastid	13.78	48.28
CDY08000	Canola	cytosol	13.39	43.87
GSMUA_Achr6P19310_001	Banana	endoplasmic reticulum	32.48	42.64
GSMUA_Achr6P19300_001	Banana	cytosol	12.4	37.72
PGSC0003DMT400056710	Potato	cytosol	44.29	37.07
KRH07367	Soybean	cytosol	44.88	36.54
Solyc09g057950.2.1	Tomato	cytosol	43.11	35.96
CDY07998	Canola	cytosol	43.31	35.71
CDX74047	Canola	cytosol	42.91	34.99
AT3G07420.1	Thale cress	cytosol	43.9	34.95
CDY28051	Canola	cytosol	43.5	34.91
Bra001250.1-P	Field mustard	cytosol	42.52	34.67
KRH66191	Soybean	plastid	43.5	34.59
VIT_00s2558g00010.t01	Wine grape	cytosol	18.31	34.44
Bra029647.1-P	Field mustard	cytosol	42.72	34.23
CDY35930	Canola	cytosol	42.52	34.07
Os12t0414500-01	Rice	plasma membrane	41.14	33.98
GSMUA_Achr2P18500_001	Banana	plasma membrane	37.99	23.28
GSMUA_Achr3P05380_001	Banana	cytosol	15.16	19.01
GSMUA_Achr10P...	Banana	cytosol	4.72	16.44

Protein Annotations

KEGG:00970+6.1.1.22	MapMan:17.2.3	Gene3D:2.40.50.140	InterPro:Asn-tRNA-ligase	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004812	GO:GO:0004816	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006412	GO:GO:0006418
GO:GO:0006421	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G31970_001	EnsemblPlants:GSMUA_Achr8P31970_001	EnsemblPlants:GSMUA_Achr8T31970_001	UniProt:M0TVE9	InterPro:NA-bd_OB-fold	PFAM:PF00152
PANTHER:PTHR22594	PANTHER:PTHR22594:SF36	SUPFAM:SSF50249	SUPFAM:SSF55681	TIGRFAMs:TIGR00457	UniParc:UPI000295E807
InterPro:aa-tRNA-synt_II	SEG:seg	:	:	:	:

Description

Putative Asparaginyl-tRNA synthetase, chloroplastic/mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G31970_001]

Coordinates

chr8:-:33500603..33502945

Molecular Weight (calculated)

56794.7 Da

IEP (calculated)

8.367

GRAVY (calculated)

-0.068

Length

508 amino acids

Sequence
(BLAST)

001: MASAQRAAAG RNQLLRVPPP IQRFKYSKRV VLKSILDRED KGLAVAGQRV VVGGWVKSRK ERAEHIVIYL LINDGSCSSN LQLVMDSSMS IPGQVVTVGN
101: SILVEGVLRR SWRGRRRVVE LIVEKLLYVG AVDLKTYPLA KPQPSSLFLR DHPHLRPRFI TIGTVARIRS NLTCACHAFF DDLGIIHVHM PIITSIATGT
201: QSQRFQVTTL LNAADQGHVD LERQKTATVY VGEVKLSEDF FGRAVYLSTS AGLHLESYAC ALSGVYTIGP VFQADESRST KKLAEMWMVE VELAFVELED
301: VMNCAEDLLH SLCYSLLATA GNDLKFASKQ IDSDCIKRLQ SITSRPFDRI TYSKALDILN QVKDRSFLTE AVWGTKLSEE HERYLADDFF ENPVIVYEFP
401: KEIKPFYVRG NANLITASAF EIIAPKASVG VLVRGSQKEE RLDVISKRIG EVGLPHEQYD WYMDLCRYGS VQRSGFSLDL EKMVVMATGI TDAEDAIPFP
501: RARGNAKL

Best Arabidopsis Sequence Match ( AT5G56680.1 )
(BLAST)

001: MADEIVPPAT QLAAVSLEND GSTVQRAQFS NRVLIRTILD RPDGGAGLAG QTVRIGGWVK SGRDQGKRTF SFLAVNDGSC PANLQVMVDP SLYDVSNLVA
101: TGTCVTVDGV LKVPPKGKGT QQQIELNVVK VIDVGTVDAS KYPLPKTKLT LETLRDVLHL RSRTNSISAV ARIRNALAFA THSFFQEHSF LYIHTPIITT
201: SDCEGAGEMF QATTLINYTE RLEQDLIDNP PPTEADVEAA RLIVIERGNV VAELKAAKAS KEAITAAVAE LKIAKETFAH IDERSRLRPG LPKKDGNIDY
301: SKDFFGRQAF LTVSGQLQVE TYACALSNVY TFGPTFRAEN SHTSRHLAEF WMVEPEIAFA DLEDDMNCAE AYVKYMCNWL LEKCYADMEL MAKNFDSGCI
401: DRLKLVASTP FGRITYTKAI ELLEEAVAKG KEFDNNVEWG IDLASEHERY LTEVLFQKPL IVYNYPKGIK AFYMRLNDDE KTVAAMDVLV PKVGELIGGS
501: QREERYDVIK KRIEEMGLPI EPYEWYLDLR RYGTVKHCGF GLGFERMILF ATGLDNIRDV IPFPRYPGKA DL

Arabidopsis Description

SYNC1Asparagine--tRNA ligase, cytoplasmic 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.