Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- peroxisome 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P22900_001 | Banana | peroxisome | 29.17 | 36.36 |
| GSMUA_Achr7P07880_001 | Banana | peroxisome, plasma membrane, unclear | 39.06 | 20.44 |
| GSMUA_Achr6P19880_001 | Banana | peroxisome | 38.54 | 20.05 |
| GSMUA_Achr3P01940_001 | Banana | peroxisome | 33.33 | 17.58 |
| GSMUA_Achr7P01200_001 | Banana | peroxisome | 6.77 | 8.18 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P01210_001 | EnsemblPlants:GSMUA_Achr7T01210_001 | EnsemblPlantsGene:GSMUA_Achr7G01210_001 | Gene3D:3.20.20.70 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Aldolase_TIM | InterPro:FMN-dep_DH |
| InterPro:IPR013785 | PANTHER:PTHR10578 | PANTHER:PTHR10578:SF80 | PFAM:PF01070 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF51395 | UniParc:UPI000296DC16 | UniProt:M0TDR1 | MapMan:35.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G01210_001]
Coordinates
chr7:+:925046..926204
Molecular Weight (calculated)
21217.5 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.062
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MNTLILMFLL FYFKMSCRFT LDLGKMDKHI MNSNSIRLQT DLMPTGCEVV ADNHYHAHFC ERSPHCRRQQ PLQTCHTSWC SRCHCLQPWS WSARLCSSHH
101: RCTGRGCQGC TGSCSRLLEG GVCGGTDVFE ALALGASGVF ASKNDTGRPV VFALAAEGEA GVRNALQMLR DEFELTMALS GCTSEELAAV AW
101: RCTGRGCQGC TGSCSRLLEG GVCGGTDVFE ALALGASGVF ASKNDTGRPV VFALAAEGEA GVRNALQMLR DEFELTMALS GCTSEELAAV AW
001: MEITNVTEYD AIAKAKLPKM VYDYYASGAE DQWTLQENRN AFARILFRPR ILIDVNKIDM ATTVLGFKIS MPIMVAPTAF QKMAHPDGEY ATARAASAAG
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEASIDQIA
201: NDSGLASYVA GQIDRTLSWK DIQWLQTITN MPILVKGVLT GEDARIAIQA GAAGIIVSNH GARQLDYVPA TISALEEVVK ATQGRVPVFL DGGVRRGTDV
301: FKALALGASG IFIGRPVVFA LAAEGEAGVK KVLQMLRDEF ELTMALSGCR SLSEITRNHI VTEWDTPRHL PRL
101: TIMTLSSWAT SSVEEVASTG PGIRFFQLYV YKNRKVVEQL VRRAEKAGFK AIALTVDTPR LGRRESDIKN RFTLPPNLTL KNFEGLDLGK MDEASIDQIA
201: NDSGLASYVA GQIDRTLSWK DIQWLQTITN MPILVKGVLT GEDARIAIQA GAAGIIVSNH GARQLDYVPA TISALEEVVK ATQGRVPVFL DGGVRRGTDV
301: FKALALGASG IFIGRPVVFA LAAEGEAGVK KVLQMLRDEF ELTMALSGCR SLSEITRNHI VTEWDTPRHL PRL
Arabidopsis Description
GOX2 [Source:UniProtKB/TrEMBL;Acc:A0A178VD55]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.