Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G068520.6 | Barley | nucleus | 99.8 | 99.8 |
| TraesCS1B01G318800.3 | Wheat | nucleus | 83.64 | 90.2 |
| TraesCS1A01G308100.2 | Wheat | nucleus | 83.43 | 89.98 |
| TraesCS1D01G307500.2 | Wheat | nucleus | 83.43 | 89.98 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 12.93 | 38.79 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 40.2 | 32.2 |
| Os05t0490600-00 | Rice | nucleus | 25.45 | 31.98 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 20.2 | 30.12 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 22.22 | 28.21 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 23.84 | 27.63 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 25.25 | 26.48 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 21.21 | 26.25 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G001230.9 | EnsemblPlantsGene:HORVU0Hr1G001230 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF475 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000B4759F7 | UniProt:A0A287DU69 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:6505240..6509253
Molecular Weight (calculated)
54409.0 Da
IEP (calculated)
4.947
GRAVY (calculated)
-0.562
Length
495 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRAKSESDQ EMPALDQADL ASRDDDSARV SPRRRPGPQL KKGPWTPAED AVLEAYVKKH GVQNWNVVQK DTGLLRCGKS CRLRWANHLR PDLKKGTFTK
101: EEENLIIKLH SKMGNKWARM AARLPGRTDN EIKNYWNTRR KKCQRTSTPI YPADICLQAS NEDQHESADL SFSEKLANDL LHGNGLYDPS STWGGFIDDQ
201: EALSYAPQLP DVSFSNLPAL YFESKNYGFM DQVNQAEVLK ESEISFPLLN AAINGTFSSA DQSFNKSEKL LLGFFCDCVT NFSYKTASPS AGTFDGSHAF
301: SNGNFSTSRP ITGPWKIELP SFQYAGSDPN NWSTYGTCAA QGANFADPCM HSSAAMASAK FEHMCVVPRN SGQFEEPLPE AHAVSSAENQ QLSVGSSSAS
401: TGSPCDAMVE TSELHLLEQD PNLNALVNSC FSAPPLCQAS PDELQCSDFS SAASPVFGSD EPTVPQYEIG YLLPHPEDSR TDAFSHWSAM PSVFQ
101: EEENLIIKLH SKMGNKWARM AARLPGRTDN EIKNYWNTRR KKCQRTSTPI YPADICLQAS NEDQHESADL SFSEKLANDL LHGNGLYDPS STWGGFIDDQ
201: EALSYAPQLP DVSFSNLPAL YFESKNYGFM DQVNQAEVLK ESEISFPLLN AAINGTFSSA DQSFNKSEKL LLGFFCDCVT NFSYKTASPS AGTFDGSHAF
301: SNGNFSTSRP ITGPWKIELP SFQYAGSDPN NWSTYGTCAA QGANFADPCM HSSAAMASAK FEHMCVVPRN SGQFEEPLPE AHAVSSAENQ QLSVGSSSAS
401: TGSPCDAMVE TSELHLLEQD PNLNALVNSC FSAPPLCQAS PDELQCSDFS SAASPVFGSD EPTVPQYEIG YLLPHPEDSR TDAFSHWSAM PSVFQ
001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C
Arabidopsis Description
MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.