Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G251700.1 | Wheat | nucleus | 96.97 | 44.82 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 94.55 | 43.94 |
| Zm00001d031515_P001 | Maize | nucleus | 65.45 | 36.73 |
| EES15365 | Sorghum | nucleus | 67.88 | 36.25 |
| Bra007536.1-P | Field mustard | nucleus | 56.36 | 34.57 |
| CDX71809 | Canola | nucleus | 56.97 | 34.56 |
| CDY41164 | Canola | nucleus | 56.36 | 34.19 |
| Bra003413.1-P | Field mustard | nucleus | 57.58 | 32.65 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 63.64 | 32.61 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 60.0 | 32.04 |
| KRH36402 | Soybean | nucleus | 59.39 | 32.03 |
| Solyc10g019260.1.1 | Tomato | nucleus | 58.79 | 31.91 |
| PGSC0003DMT400066066 | Potato | nucleus | 58.79 | 31.7 |
| KRH66578 | Soybean | nucleus | 59.39 | 31.51 |
| AT3G60460.1 | Thale cress | nucleus | 56.97 | 31.33 |
| KRH48761 | Soybean | nucleus | 58.79 | 31.29 |
| CDX67827 | Canola | nucleus | 57.58 | 31.25 |
| KRH27535 | Soybean | nucleus | 56.97 | 31.23 |
| CDY64759 | Canola | nucleus | 56.97 | 30.82 |
| Solyc01g090530.1.1 | Tomato | nucleus | 55.76 | 28.84 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 40.61 | 20.18 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 40.61 | 17.18 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 41.21 | 17.0 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 41.21 | 15.93 |
| HORVU7Hr1G090120.1 | Barley | mitochondrion, nucleus | 40.0 | 13.98 |
| HORVU1Hr1G068520.6 | Barley | nucleus | 38.79 | 12.93 |
| HORVU0Hr1G001230.9 | Barley | nucleus | 38.79 | 12.93 |
| HORVU3Hr1G079490.4 | Barley | nucleus | 39.39 | 10.52 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G051740.1 | EnsemblPlantsGene:HORVU7Hr1G051740 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF488 | PFAM:PF00249 | PFAM:PF13921 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000B4823B7 | UniProt:A0A287WH67 | MapMan:15.5.2.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:195559671..195560519
Molecular Weight (calculated)
18190.4 Da
IEP (calculated)
11.472
GRAVY (calculated)
-0.881
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPRGGGDRA AVRKGPWTAE EDEVLHQHVR EHGPREWSSI RSKGLLPRTG KSCRLRWVNK LRPDLKTGCK FSSEEERVVI DLQAQFGNKW ARIATYLPGR
101: TDNDVKNFWS TRQKRLARIL RAPLPRRRPA AAKHGGGGGV GATSSSAATN SHEAAAARAS EDSSS
101: TDNDVKNFWS TRQKRLARIL RAPLPRRRPA AAKHGGGGGV GATSSSAATN SHEAAAARAS EDSSS
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.