Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71809 | Canola | nucleus | 76.0 | 83.82 |
| Bra007536.1-P | Field mustard | nucleus | 75.0 | 83.64 |
| CDY41164 | Canola | nucleus | 75.67 | 83.46 |
| Bra003413.1-P | Field mustard | nucleus | 77.67 | 80.07 |
| CDX67827 | Canola | nucleus | 79.67 | 78.62 |
| CDY64759 | Canola | nucleus | 79.67 | 78.36 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 31.33 | 56.97 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 54.33 | 52.75 |
| Os06t0118150-00 | Rice | nucleus | 16.67 | 50.0 |
| KRH48761 | Soybean | nucleus | 51.67 | 50.0 |
| KRH66578 | Soybean | nucleus | 50.67 | 48.87 |
| PGSC0003DMT400066066 | Potato | nucleus | 45.33 | 44.44 |
| Solyc10g019260.1.1 | Tomato | nucleus | 44.67 | 44.08 |
| Solyc01g090530.1.1 | Tomato | nucleus | 45.33 | 42.63 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 43.0 | 38.97 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 43.0 | 38.86 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 43.0 | 38.86 |
| Zm00001d031515_P001 | Maize | nucleus | 37.0 | 37.76 |
| EES15365 | Sorghum | nucleus | 37.0 | 35.92 |
| Zm00001d002750_P001 | Maize | nucleus | 39.0 | 34.01 |
| Zm00001d026186_P001 | Maize | nucleus | 37.33 | 32.37 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 34.67 | 32.3 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 37.33 | 31.37 |
| EES11224 | Sorghum | nucleus | 39.0 | 30.95 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 36.33 | 30.7 |
| AT4G26930.1 | Thale cress | nucleus | 24.33 | 18.77 |
| AT2G26960.1 | Thale cress | nucleus | 24.33 | 17.1 |
| AT2G26950.1 | Thale cress | cytosol | 21.33 | 16.75 |
| AT5G55020.1 | Thale cress | nucleus | 24.67 | 14.15 |
| AT5G06100.4 | Thale cress | nucleus | 24.33 | 14.04 |
| AT2G32460.1 | Thale cress | nucleus | 22.33 | 13.67 |
| AT3G11440.1 | Thale cress | nucleus | 24.33 | 13.2 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:825217 | UniProt:A0A178VEK7 | ProteinID:AEE80064.2 | EMBL:AF469468 |
| ArrayExpress:AT3G60460 | EnsemblPlantsGene:AT3G60460 | RefSeq:AT3G60460 | TAIR:AT3G60460 | RefSeq:AT3G60460-TAIR-G | EnsemblPlants:AT3G60460.1 |
| TAIR:AT3G60460.1 | Unigene:At.34443 | ProteinID:CAB81832.1 | Symbol:DUO1 | UniProt:F4JBU2 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044839 | GO:GO:0045893 | GO:GO:0048235 |
| GO:GO:0048555 | GO:GO:0055047 | EMBL:HM776521 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| RefSeq:NP_191605.2 | ProteinID:OAP04750.1 | PFAM:PF00249 | PFAM:PF13921 | PO:PO:0000084 | PO:PO:0020097 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0007E183AC | SEG:seg | : | : | : | : |
Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
Coordinates
chr3:-:22342321..22343576
Molecular Weight (calculated)
34066.9 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.752
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.