Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026186_P001 | Maize | nucleus | 81.1 | 80.64 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 59.88 | 62.05 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 59.88 | 62.05 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 59.01 | 61.33 |
| Os06t0118150-00 | Rice | nucleus | 16.86 | 58.0 |
| Zm00001d031515_P001 | Maize | nucleus | 38.66 | 45.24 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 39.24 | 41.93 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 37.5 | 41.75 |
| KRH36402 | Soybean | nucleus | 36.63 | 41.18 |
| KRH66578 | Soybean | nucleus | 37.21 | 41.16 |
| KRH27535 | Soybean | nucleus | 35.76 | 40.86 |
| KRH48761 | Soybean | nucleus | 36.63 | 40.65 |
| Bra007536.1-P | Field mustard | nucleus | 31.69 | 40.52 |
| CDX71809 | Canola | nucleus | 31.98 | 40.44 |
| CDY41164 | Canola | nucleus | 31.69 | 40.07 |
| PGSC0003DMT400066066 | Potato | nucleus | 34.88 | 39.22 |
| Bra003413.1-P | Field mustard | nucleus | 33.14 | 39.18 |
| Solyc10g019260.1.1 | Tomato | nucleus | 34.59 | 39.14 |
| AT3G60460.1 | Thale cress | nucleus | 34.01 | 39.0 |
| Solyc01g090530.1.1 | Tomato | nucleus | 36.05 | 38.87 |
| CDY64759 | Canola | nucleus | 34.3 | 38.69 |
| CDX67827 | Canola | nucleus | 34.01 | 38.49 |
| Zm00001d033075_P001 | Maize | nucleus | 21.51 | 19.89 |
| Zm00001d014364_P002 | Maize | nucleus | 22.38 | 19.15 |
| Zm00001d013801_P001 | Maize | nucleus | 23.84 | 17.86 |
| Zm00001d036551_P001 | Maize | nucleus | 21.51 | 16.82 |
| Zm00001d046517_P001 | Maize | nucleus | 18.6 | 15.96 |
| Zm00001d046518_P001 | Maize | nucleus | 18.6 | 15.96 |
| Zm00001d046519_P001 | Maize | nucleus | 18.6 | 15.96 |
| Zm00001d012544_P001 | Maize | nucleus | 21.8 | 15.24 |
| Zm00001d036577_P001 | Maize | nucleus | 22.09 | 14.87 |
| Zm00001d000361_P001 | Maize | nucleus | 22.09 | 14.7 |
| Zm00001d043131_P002 | Maize | nucleus | 23.55 | 14.49 |
| Zm00001d036883_P001 | Maize | nucleus | 13.37 | 9.94 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100037744 | MapMan:15.5.2.1 | UniProt:A0A1D6E421 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | ProteinID:ONM15268.1 |
| PFAM:PF00249 | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004DE9547 | EnsemblPlantsGene:Zm00001d002750 | EnsemblPlants:Zm00001d002750_P001 | EnsemblPlants:Zm00001d002750_T001 |
| SEG:seg | : | : | : | : | : |
Description
MYB-transcription factor 104R2R3MYB-domain protein
Coordinates
chr2:-:21406606..21408172
Molecular Weight (calculated)
37010.0 Da
IEP (calculated)
8.878
GRAVY (calculated)
-0.408
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MARPPGGARR RGGGSGRRDA AGGCEAVRKG HWTAEEDGVL LEHVRVHGPR DWSFIRSKGL LPRTGKSCRL RWVNKLRPDL KTGCKFSAEE ERVVLELQAQ
101: FGNKWARIAT YLPGRTDNDV KNFWSTRQKR LARLLGTPIR RRQSSRSRSA KAPVASSLKS RPATVVKPSQ VPCLDQVPLE GSSTGVHPCS AGAATPFMDA
201: HSISAALAPY DWAGSGLASS DGALPLASDI HACSSSNAAA LPPLLPFDQP PCTELGFPGL PAGWNMAPGF DNVGTMDHLA YQELLPVTQP APMMLPFFGT
301: EYLHGGAKAE LPDAGPDYFF DDLPPDMFDS LDQPPRPLSP PATS
101: FGNKWARIAT YLPGRTDNDV KNFWSTRQKR LARLLGTPIR RRQSSRSRSA KAPVASSLKS RPATVVKPSQ VPCLDQVPLE GSSTGVHPCS AGAATPFMDA
201: HSISAALAPY DWAGSGLASS DGALPLASDI HACSSSNAAA LPPLLPFDQP PCTELGFPGL PAGWNMAPGF DNVGTMDHLA YQELLPVTQP APMMLPFFGT
301: EYLHGGAKAE LPDAGPDYFF DDLPPDMFDS LDQPPRPLSP PATS
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.