Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400066066 | Potato | nucleus | 92.11 | 91.5 |
| HORVU7Hr1G051740.1 | Barley | nucleus | 31.91 | 58.79 |
| VIT_15s0021g02040.t01 | Wine grape | nucleus | 54.61 | 53.72 |
| Solyc01g090530.1.1 | Tomato | nucleus | 54.28 | 51.72 |
| Os06t0118150-00 | Rice | nucleus | 16.78 | 51.0 |
| KRH48761 | Soybean | nucleus | 49.67 | 48.71 |
| KRH66578 | Soybean | nucleus | 49.34 | 48.23 |
| CDX71809 | Canola | nucleus | 42.43 | 47.43 |
| Bra007536.1-P | Field mustard | nucleus | 41.45 | 46.84 |
| CDY41164 | Canola | nucleus | 41.45 | 46.32 |
| AT3G60460.1 | Thale cress | nucleus | 44.08 | 44.67 |
| Bra003413.1-P | Field mustard | nucleus | 42.11 | 43.99 |
| CDY64759 | Canola | nucleus | 44.08 | 43.93 |
| CDX67827 | Canola | nucleus | 43.42 | 43.42 |
| TraesCS2B01G434400.1 | Wheat | nucleus | 40.46 | 37.16 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 40.13 | 36.75 |
| TraesCS2A01G415400.1 | Wheat | nucleus | 39.8 | 36.45 |
| Zm00001d031515_P001 | Maize | nucleus | 35.2 | 36.39 |
| Zm00001d002750_P001 | Maize | nucleus | 39.14 | 34.59 |
| EES15365 | Sorghum | nucleus | 34.87 | 34.3 |
| Zm00001d026186_P001 | Maize | nucleus | 38.82 | 34.1 |
| GSMUA_Achr1P01660_001 | Banana | nucleus | 34.87 | 32.92 |
| EES11224 | Sorghum | nucleus | 39.8 | 32.01 |
| TraesCS7A01G251700.1 | Wheat | nucleus | 37.17 | 31.65 |
| TraesCS7B01G139400.1 | Wheat | nucleus | 36.51 | 31.27 |
| Solyc06g073640.2.1 | Tomato | nucleus | 24.67 | 14.88 |
| Solyc07g052300.2.1 | Tomato | nucleus | 22.37 | 13.99 |
| Solyc01g009070.2.1 | Tomato | nucleus | 24.67 | 13.97 |
| Solyc11g072060.1.1 | Tomato | nucleus | 23.68 | 13.33 |
| Solyc12g005890.1.1 | Tomato | nucleus | 14.8 | 11.11 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| UniProt:K4CZ44 | InterPro:Myb_dom | PFAM:PF13921 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF488 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:Solyc10g019260.1 | EnsemblPlants:Solyc10g019260.1.1 | UniParc:UPI000276ABA4 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:12772710..12774203
Molecular Weight (calculated)
35193.3 Da
IEP (calculated)
6.377
GRAVY (calculated)
-0.795
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGRRSSCSY HRYDFDDDFD EIKKGSWKEE EDEVLINHVK KYGPRDWSSI RSKGLLQRTG KSCRLRWVNK LRPNLKNGVK FSGEEERTVI ELQGQFGNKW
101: ARIATYLSGR TDNDVKNFWS SRQKRLARIL RTSQNNTTRT CASPLILEAP KLSSSKEHEE SLSKSQSCSS SYIDNSDHMM NQVHVPLEDL VMTPNSIAFE
201: PNMLMHHQLH IRSATTNPND EKKLGIIESS HIPTHDDDFA LPLENQEFSI MPNFIDVLGH GFDNVEIPYV NRQIEKPLTP DSFIDDFPLD MFEHIEPLQS
301: PSQW
101: ARIATYLSGR TDNDVKNFWS SRQKRLARIL RTSQNNTTRT CASPLILEAP KLSSSKEHEE SLSKSQSCSS SYIDNSDHMM NQVHVPLEDL VMTPNSIAFE
201: PNMLMHHQLH IRSATTNPND EKKLGIIESS HIPTHDDDFA LPLENQEFSI MPNFIDVLGH GFDNVEIPYV NRQIEKPLTP DSFIDDFPLD MFEHIEPLQS
301: PSQW
001: MRKMEAKKEE IKKGPWKAEE DEVLINHVKR YGPRDWSSIR SKGLLQRTGK SCRLRWVNKL RPNLKNGCKF SADEERTVIE LQSEFGNKWA RIATYLPGRT
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
101: DNDVKNFWSS RQKRLARILH NSSDASSSSF NPKSSSSHRL KGKNVKPIRQ SSQGFGLVEE EVTVSSSCSQ MVPYSSDQVG DEVLRLPDLG VKLEHQPFAF
201: GTDLVLAEYS DSQNDANQQA ISPFSPESRE LLARLDDPFY YDILGPADSS EPLFALPQPF FEPSPVPRRC RHVSKDEEAD VFLDDFPADM FDQVDPIPSP
Arabidopsis Description
DUO1DUO1 [Source:UniProtKB/TrEMBL;Acc:F4JBU2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.