Factsheet for Solyc07g052300.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074486	Potato	nucleus	91.77	92.15
Bra021791.1-P	Field mustard	nucleus	26.54	33.25
Zm00001d033075_P001	Maize	nucleus	24.9	32.53
CDY19141	Canola	nucleus	29.42	32.21
KRH26778	Soybean	nucleus	31.48	32.08
CDY66700	Canola	nucleus	29.22	31.98
CDY15321	Canola	nucleus	29.42	31.92
HORVU7Hr1G027370.1	Barley	nucleus	27.98	31.85
AT2G32460.1	Thale cress	nucleus	32.1	31.84
KRH22574	Soybean	nucleus	31.28	31.73
CDY68663	Canola	nucleus	29.84	31.73
HORVU7Hr1G105450.1	Barley	nucleus	21.6	31.63
Bra005597.1-P	Field mustard	nucleus	30.86	31.32
CDY48264	Canola	nucleus	30.86	31.32
VIT_12s0059g00700.t01	Wine grape	nucleus	27.37	31.22
CDY12203	Canola	nucleus	30.86	31.18
Bra022888.1-P	Field mustard	nucleus	29.22	31.07
TraesCS4A01G467100.1	Wheat	nucleus	17.49	30.04
Solyc06g073640.2.1	Tomato	nucleus	31.07	29.96
TraesCS7B01G031000.1	Wheat	nucleus	25.93	29.86
TraesCS7D01G130100.1	Wheat	nucleus	26.13	29.81
KXG38121	Sorghum	nucleus	27.78	29.54
Zm00001d014364_P002	Maize	nucleus	24.28	29.35
TraesCS6D01G126900.1	Wheat	nucleus	23.87	29.07
HORVU6Hr1G026450.1	Barley	nucleus	23.87	29.0
HORVU7Hr1G105520.2	Barley	nucleus	23.25	28.97
Solyc12g005890.1.1	Tomato	nucleus	24.07	28.89
Zm00001d013801_P001	Maize	nucleus	26.95	28.54
TraesCS7B01G357900.1	Wheat	nucleus	23.46	28.5
TraesCS7D01G446700.1	Wheat	nucleus	23.05	28.0
Os06t0679400-01	Rice	nucleus	25.51	27.74
EER90224	Sorghum	nucleus	24.07	27.34
Solyc01g009070.2.1	Tomato	nucleus	29.84	27.0
Solyc01g090530.1.1	Tomato	nucleus	16.26	24.76
Solyc10g019260.1.1	Tomato	nucleus	13.99	22.37
Os03t0578900-00	Rice	nucleus	24.28	22.35
Zm00001d036577_P001	Maize	nucleus	22.22	21.14
Solyc11g072060.1.1	Tomato	nucleus	23.25	20.93

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K4CFC9	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF475
InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	EnsemblPlantsGene:Solyc07g052300.2	EnsemblPlants:Solyc07g052300.2.1	UniParc:UPI000276B658
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:60797135..60800394

Molecular Weight (calculated)

53800.5 Da

IEP (calculated)

5.979

GRAVY (calculated)

-0.766

Length

486 amino acids

Sequence
(BLAST)

001: MAPDDRGTRN GGGTRQALKK GPWTAGEDAI LMDYVKKHGE GNWNAVQRNS GLMRCGKSCR LRWANHLRPH LKKGAFTPEE ERIIIDLHAK LGNKWARMAA
101: QLPGRTDNEI KNYWNTRLKR RQRAGLPIYP QELQSQNQQE NNQPQSLISS PFDPQRATYN NPPPLSLLNV FNPSTMRPSI THQFPLSSNA IFRDPPKGLP
201: LTLPSTLRNS PLFSGSASMP NNNFGPTLSN LMPVSSFQQN YPNFSFTTRP FMGIPSNQNE LMSGMGLSSI NYPSGPSVMT ASSCSDFGSS DANNYAHVEL
301: SQGNSGLLED LLKGTQNFPR STNIEENNSL DLNGKGKSLW QDYGLVGEEA RDHQDEAFLT EESVYSFAHG GDVNLNNSSE SSSTDPNASS GIFLRKEGSL
401: QGINQVDEHI MSLLNNFPLD QEPVPNWYDE TDDKKMNSEI GADDHKAESL GEDSSKSQVA ITTTSGLKQH DWELGGCCWN NMPPFC

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.