Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G357900.1 | Wheat | nucleus | 94.0 | 94.0 |
| TraesCS7A01G458700.1 | Wheat | nucleus | 94.5 | 93.56 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 87.0 | 89.23 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 71.25 | 85.84 |
| Os06t0679400-01 | Rice | nucleus | 68.0 | 60.85 |
| Zm00001d014364_P002 | Maize | nucleus | 59.25 | 58.96 |
| EER90224 | Sorghum | nucleus | 61.0 | 57.01 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 49.25 | 49.37 |
| CDY72198 | Canola | nucleus | 21.5 | 42.36 |
| CDY69320 | Canola | nucleus | 21.5 | 42.36 |
| Zm00001d036577_P001 | Maize | nucleus | 51.5 | 40.31 |
| AT4G26930.1 | Thale cress | nucleus | 30.75 | 31.62 |
| GSMUA_Achr7P00280_001 | Banana | nucleus | 25.75 | 31.6 |
| GSMUA_Achr4P23690_001 | Banana | nucleus | 28.75 | 31.25 |
| CDY19890 | Canola | nucleus | 30.5 | 28.44 |
| CDY67258 | Canola | nucleus | 30.5 | 28.37 |
| KRH14648 | Soybean | extracellular, golgi | 24.0 | 28.24 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 29.5 | 27.7 |
| GSMUA_Achr2P13930_001 | Banana | nucleus | 22.5 | 27.36 |
| CDY20794 | Canola | nucleus | 27.75 | 27.01 |
| Bra021791.1-P | Field mustard | nucleus | 26.0 | 26.8 |
| GSMUA_Achr4P27730_001 | Banana | nucleus | 23.5 | 26.48 |
| KRH46194 | Soybean | nucleus | 30.25 | 26.48 |
| KRH46196 | Soybean | nucleus | 24.25 | 26.43 |
| KRH46191 | Soybean | nucleus | 30.25 | 26.25 |
| PGSC0003DMT400036086 | Potato | nucleus | 30.75 | 25.84 |
| CDY15321 | Canola | nucleus | 28.25 | 25.22 |
| CDY66700 | Canola | nucleus | 27.75 | 25.0 |
| CDY19141 | Canola | nucleus | 27.5 | 24.77 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 26.25 | 24.65 |
| Bra000531.1-P | Field mustard | nucleus | 26.75 | 24.6 |
| CDY38535 | Canola | nucleus | 26.5 | 24.54 |
| CDX83247 | Canola | nucleus | 26.5 | 24.37 |
| Bra002042.1-P | Field mustard | nucleus | 28.5 | 24.26 |
| KRG98748 | Soybean | nucleus | 32.0 | 24.2 |
| PGSC0003DMT400015156 | Potato | nucleus | 30.25 | 24.1 |
| TraesCS2D01G412500.1 | Wheat | nucleus | 20.0 | 24.1 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 31.5 | 24.05 |
| Solyc06g073640.2.1 | Tomato | nucleus | 30.25 | 24.01 |
| CDY66041 | Canola | nucleus | 28.75 | 23.91 |
| PGSC0003DMT400058426 | Potato | nucleus | 31.0 | 23.71 |
| CDY68663 | Canola | nucleus | 27.0 | 23.63 |
| KRH22574 | Soybean | nucleus | 28.25 | 23.59 |
| KRH62709 | Soybean | nucleus | 30.0 | 23.53 |
| KRH26778 | Soybean | nucleus | 28.0 | 23.48 |
| Bra002938.1-P | Field mustard | nucleus | 33.75 | 23.48 |
| AT2G26960.1 | Thale cress | nucleus | 25.0 | 23.42 |
| Bra022888.1-P | Field mustard | nucleus | 26.75 | 23.41 |
| PGSC0003DMT400074486 | Potato | nucleus | 28.25 | 23.35 |
| KRH56248 | Soybean | nucleus | 29.75 | 23.15 |
| CDY08526 | Canola | nucleus | 29.0 | 23.11 |
| CDY56849 | Canola | nucleus | 29.0 | 23.06 |
| AT2G32460.1 | Thale cress | nucleus | 28.25 | 23.06 |
| VIT_19s0090g00590.t01 | Wine grape | nucleus | 26.75 | 23.06 |
| Solyc07g052300.2.1 | Tomato | nucleus | 28.0 | 23.05 |
| Bra028997.1-P | Field mustard | nucleus | 31.75 | 22.97 |
| AT5G55020.1 | Thale cress | nucleus | 30.0 | 22.94 |
| TraesCS1D01G307500.2 | Wheat | nucleus | 26.25 | 22.88 |
| KRG89766 | Soybean | nucleus | 29.75 | 22.84 |
| CDY61426 | Canola | nucleus | 31.75 | 22.8 |
| Bra005597.1-P | Field mustard | nucleus | 27.25 | 22.76 |
| CDY48264 | Canola | nucleus | 27.25 | 22.76 |
| CDY43016 | Canola | nucleus | 31.5 | 22.74 |
| CDY12203 | Canola | nucleus | 27.25 | 22.66 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 31.5 | 22.54 |
| Bra034842.1-P | Field mustard | nucleus | 29.0 | 22.44 |
| Solyc01g009070.2.1 | Tomato | nucleus | 30.0 | 22.35 |
| KRH20589 | Soybean | nucleus | 29.75 | 22.33 |
| Bra035547.1-P | Field mustard | nucleus | 30.25 | 22.32 |
| KRH18640 | Soybean | nucleus | 29.75 | 22.28 |
| KRH13249 | Soybean | nucleus | 29.5 | 22.14 |
| AT5G06100.4 | Thale cress | nucleus | 28.75 | 22.12 |
| PGSC0003DMT400070549 | Potato | nucleus | 26.0 | 21.44 |
| TraesCS3D01G329400.1 | Wheat | nucleus | 31.5 | 21.39 |
| AT3G11440.1 | Thale cress | nucleus | 29.5 | 21.34 |
| AT2G26950.1 | Thale cress | cytosol | 20.25 | 21.2 |
| Solyc12g005890.1.1 | Tomato | nucleus | 20.5 | 20.25 |
| TraesCS7D01G373400.1 | Wheat | mitochondrion, nucleus | 26.0 | 20.12 |
| CDX71481 | Canola | nucleus | 28.0 | 19.65 |
| Solyc11g072060.1.1 | Tomato | nucleus | 25.0 | 18.52 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF13921 | InterPro:PG/BPGM_mutase_AS | ScanProsite:PS00175 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF616 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | EnsemblPlantsGene:TraesCS7D01G446700 | EnsemblPlants:TraesCS7D01G446700.1 | TIGR:cd00167 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:566989680..566992515
Molecular Weight (calculated)
43477.2 Da
IEP (calculated)
7.600
GRAVY (calculated)
-0.668
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAMDTTVP RSGLGEGGGG GGGLKKGPWT QAEDRVLLDH VRRHGEGNWN AVRRETGLQR CGKSCRLRWA NHLRPNLRKG PFSPEEERLI LRLHGLIGNK
101: WARISTHLPG RTDNEVKNFW NTRLKRRQRA GQSLYPPDVE REIAFMRAQN INPFADADGN TAASPFSDPF ALPPRPPSST KPASHSHSSP LINQHYPLLN
201: EMQGMQMRHH AVQHAHPQPA FHHHHGGIRL PGLPPLPTRP RELPSNQIET ASCSGGADGL LEALLLGVDE HQLPRPNHGV CRAGSMPDLM YGGVSSGSDS
301: DVTSQFPPGP GGQDPHHGGK WDFLVDDVKP PMRRATSAAE NETSGMFGVA HGSISGEWFG TGVGSPGPSS VVTTEDEFGL EMQQLMSSLP LSADELNWNA
101: WARISTHLPG RTDNEVKNFW NTRLKRRQRA GQSLYPPDVE REIAFMRAQN INPFADADGN TAASPFSDPF ALPPRPPSST KPASHSHSSP LINQHYPLLN
201: EMQGMQMRHH AVQHAHPQPA FHHHHGGIRL PGLPPLPTRP RELPSNQIET ASCSGGADGL LEALLLGVDE HQLPRPNHGV CRAGSMPDLM YGGVSSGSDS
301: DVTSQFPPGP GGQDPHHGGK WDFLVDDVKP PMRRATSAAE NETSGMFGVA HGSISGEWFG TGVGSPGPSS VVTTEDEFGL EMQQLMSSLP LSADELNWNA
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS GELIKVTC
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.