CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56248	Soybean	nucleus	93.33	92.61
KRH13249	Soybean	nucleus	64.31	61.54
KRH20589	Soybean	nucleus	63.92	61.16
GSMUA_Achr7P21550_001	Banana	nucleus	15.1	58.33
CDY72198	Canola	nucleus	20.98	52.71
CDY69320	Canola	nucleus	20.78	52.22
VIT_13s0067g01630.t01	Wine grape	nucleus	56.08	51.16
GSMUA_Achr10P...	Banana	nucleus	35.49	46.89
KRH18640	Soybean	nucleus	40.78	38.95
KRG89766	Soybean	nucleus	39.22	38.39
GSMUA_Achr1P17150_001	Banana	nucleus	42.35	36.86
AT5G06100.4	Thale cress	nucleus	37.25	36.54
CDY08526	Canola	nucleus	35.49	36.06
CDY56849	Canola	nucleus	35.49	35.98
GSMUA_AchrUn_...	Banana	nucleus	39.8	35.49
Bra034842.1-P	Field mustard	nucleus	35.49	35.01
Bra002042.1-P	Field mustard	nucleus	32.16	34.89
AT3G11440.1	Thale cress	nucleus	37.65	34.72
CDY66041	Canola	nucleus	32.16	34.1
HORVU7Hr1G105450.1	Barley	nucleus	22.16	34.04
Zm00001d033075_P001	Maize	nucleus	24.12	33.06
HORVU7Hr1G027370.1	Barley	nucleus	27.06	32.32
TraesCS4A01G467100.1	Wheat	nucleus	17.45	31.45
KRH46196	Soybean	nucleus	22.35	31.06
TraesCS7B01G031000.1	Wheat	nucleus	25.69	31.04
TraesCS7D01G130100.1	Wheat	nucleus	25.88	30.99
KRH14648	Soybean	extracellular, golgi	20.59	30.88
KRH46194	Soybean	nucleus	27.25	30.42
Zm00001d014364_P002	Maize	nucleus	23.92	30.35
HORVU7Hr1G105520.2	Barley	nucleus	23.14	30.26
KRH26778	Soybean	nucleus	28.24	30.19
TraesCS7D01G446700.1	Wheat	nucleus	23.53	30.0
KRH22574	Soybean	nucleus	28.04	29.85
TraesCS7B01G357900.1	Wheat	nucleus	23.33	29.75
HORVU6Hr1G026450.1	Barley	nucleus	22.94	29.25
EER90224	Sorghum	nucleus	24.31	28.97
TraesCS6D01G126900.1	Wheat	nucleus	22.55	28.82
KRH46191	Soybean	nucleus	25.88	28.63
KXG38121	Sorghum	nucleus	25.49	28.45
Zm00001d013801_P001	Maize	nucleus	25.49	28.32
Os06t0679400-01	Rice	nucleus	24.31	27.74
KRH48761	Soybean	nucleus	16.67	27.42
GSMUA_Achr7P02510_001	Banana	nucleus	29.8	27.09
KRG98748	Soybean	nucleus	28.04	27.03
KRH66578	Soybean	nucleus	16.47	27.01
KRH27535	Soybean	nucleus	15.88	26.91
GSMUA_Achr7P21560_001	Banana	nucleus	22.35	26.15
KRH36402	Soybean	nucleus	15.69	26.14
Os03t0578900-00	Rice	nucleus	24.51	23.67
Zm00001d036577_P001	Maize	nucleus	22.35	22.31

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100792349	MapMan:15.5.2.1	EMBL:ACUP02002342	EnsemblPlantsGene:GLYMA_04G125700	GO:GO:0000981
GO:GO:0001135	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565
GO:GO:0044212	InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7KJR9	EnsemblPlants:KRH62709	ProteinID:KRH62709
ProteinID:KRH62709.1	ProteinID:KRH62710.1	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF938	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233A6AF	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:16709512..16714749

Molecular Weight (calculated)

56421.2 Da

IEP (calculated)

4.947

GRAVY (calculated)

-0.645

Length

510 amino acids

Sequence
(BLAST)

001: MSQMTNEINY NVHCNDQTGS QLNDEGNGVG MVLKKGPWTA AEDVLLVNYV QKHGEGNWNA VQKYSGLSRC GKSCRLRWAN HLRPNLKKGA FTAEEERMIA
101: ELHAKMGNKW ARMAAHLHGR TDNEIKNYWN TRMKRRQRAG LPLYPPEVLL QAFQERKHGQ GTGEISNGDG GHHDFLKKNN YEIHDAIFDS LKENQGILPF
201: LPDLPAISAN SFLPNCLGSP PYCNFLPSTL PNHDHFQEST MSFIGSSELN SNEFYPFDRI KDNNSDKISE SFGLYSPLDR GASSHGSICY SHSLSNGNSS
301: TSKLISEAAK SELPSLQIPE TEFGCWGTSP PPPLNESLDV FIHSPQPPNA LDSGSSPLNS GLLDALLYQA NTLGCSKNNS SDKSLNSSIA TPGDRAESSA
401: LNMYETEWED YADPLSPFGA TSILNEHPVV STNGNSWDDW ELFQTFSGNN ERLQSVDQVW APKSGNQSMS LLNLTLPDVL ITSDWHELYS DHDSMNQAVM
501: TEASDDISGQ

Best Arabidopsis Sequence Match ( AT5G06100.1 )
(BLAST)

001: MSYTSTDSDH NESPAADDNG SDCRSRWDGH ALKKGPWSSA EDDILIDYVN KHGEGNWNAV QKHTSLFRCG KSCRLRWANH LRPNLKKGAF SQEEEQLIVE
101: LHAKMGNRWA RMAAHLPGRT DNEIKNYWNT RIKRRQRAGL PLYPPEMHVE ALEWSQEYAK SRVMGEDRRH QDFLQLGSCE SNVFFDTLNF TDMVPGTFDL
201: ADMTAYKNMG NCASSPRYEN FMTPTIPSSK RLWESELLYP GCSSTIKQEF SSPEQFRNTS PQTISKTCSF SVPCDVEHPL YGNRHSPVMI PDSHTPTDGI
301: VPYSKPLYGA VKLELPSFQY SETTFDQWKK SSSPPHSDLL DPFDTYIQSP PPPTGGEESD LYSNFDTGLL DMLLLEAKIR NNSTKNNLYR SCASTIPSAD
401: LGQVTVSQTK SEEFDNSLKS FLVHSEMSTQ NADETPPSEL LFTLPSLEIV C

Arabidopsis Description

MYB33Transcription factor MYB33 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1W6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.