Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56849 | Canola | nucleus | 97.81 | 97.61 |
| Bra034842.1-P | Field mustard | nucleus | 99.2 | 96.33 |
| CDY72198 | Canola | nucleus | 32.27 | 79.8 |
| CDY69320 | Canola | nucleus | 32.27 | 79.8 |
| AT3G11440.1 | Thale cress | nucleus | 81.08 | 73.6 |
| CDY66041 | Canola | nucleus | 67.73 | 70.69 |
| GSMUA_Achr7P21550_001 | Banana | nucleus | 14.14 | 53.79 |
| GSMUA_Achr10P... | Banana | nucleus | 30.68 | 39.9 |
| VIT_13s0067g01630.t01 | Wine grape | nucleus | 43.43 | 39.0 |
| KRH20589 | Soybean | nucleus | 41.24 | 38.84 |
| KRH13249 | Soybean | nucleus | 40.44 | 38.09 |
| KRH56248 | Soybean | nucleus | 37.45 | 36.58 |
| KRH62709 | Soybean | nucleus | 36.06 | 35.49 |
| Zm00001d033075_P001 | Maize | nucleus | 25.7 | 34.68 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 21.71 | 32.83 |
| GSMUA_Achr1P17150_001 | Banana | nucleus | 38.25 | 32.76 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 26.89 | 31.99 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 27.09 | 31.85 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 26.89 | 31.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.06 | 31.64 |
| KXG38121 | Sorghum | nucleus | 28.69 | 31.51 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.73 | 31.45 |
| CDY68663 | Canola | nucleus | 27.69 | 30.42 |
| Zm00001d013801_P001 | Maize | nucleus | 27.29 | 29.85 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 23.11 | 29.74 |
| CDY66700 | Canola | nucleus | 26.29 | 29.73 |
| CDY15321 | Canola | nucleus | 26.49 | 29.69 |
| CDY19141 | Canola | nucleus | 26.1 | 29.5 |
| CDY38535 | Canola | nucleus | 25.3 | 29.4 |
| CDY67258 | Canola | nucleus | 25.1 | 29.3 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 23.31 | 29.25 |
| CDX83247 | Canola | nucleus | 25.3 | 29.2 |
| CDY19890 | Canola | nucleus | 24.9 | 29.14 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 23.11 | 29.0 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 23.11 | 29.0 |
| CDY20794 | Canola | nucleus | 23.31 | 28.47 |
| Zm00001d014364_P002 | Maize | nucleus | 22.71 | 28.36 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 22.51 | 28.32 |
| EER90224 | Sorghum | nucleus | 23.9 | 28.04 |
| CDY48264 | Canola | nucleus | 26.49 | 27.77 |
| CDY12203 | Canola | nucleus | 26.49 | 27.65 |
| CDX71809 | Canola | nucleus | 14.54 | 26.84 |
| CDY41164 | Canola | nucleus | 14.34 | 26.47 |
| Os06t0679400-01 | Rice | nucleus | 23.31 | 26.17 |
| CDY64759 | Canola | nucleus | 15.74 | 25.9 |
| CDX67827 | Canola | nucleus | 15.54 | 25.66 |
| GSMUA_Achr7P02510_001 | Banana | nucleus | 28.49 | 25.49 |
| GSMUA_Achr7P21560_001 | Banana | nucleus | 21.91 | 25.23 |
| CDY43016 | Canola | nucleus | 26.29 | 23.83 |
| Os03t0578900-00 | Rice | nucleus | 24.9 | 23.67 |
| CDY61426 | Canola | nucleus | 26.1 | 23.52 |
| CDX71481 | Canola | nucleus | 26.1 | 22.98 |
| Zm00001d036577_P001 | Maize | nucleus | 22.11 | 21.72 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078F580 | UniProt:A0A078F580 | EnsemblPlants:CDY08526 | ProteinID:CDY08526 |
| ProteinID:CDY08526.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00000303001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF938 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF4440 | SEG:seg |
Description
BnaA05g27620DBnaA05g27620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F580]
Coordinates
chrLK031986:-:566393..568881
Molecular Weight (calculated)
55579.2 Da
IEP (calculated)
5.743
GRAVY (calculated)
-0.561
Length
502 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTAESDDD GMHSPAGDSI GYGCKSRGKG SVLKKGPWTS TEDGILINYV RKHGEGNWNA VQKYTSLARC GKSCRLRWAN HLRPNLKKGA FSQEEERLIV
101: QMHAKMGNKW AQMAEHLPGR TDNEIKNYWN TRIKRRHRAG LPLYPPELHV EDLQWSEEYI TSNVTRVNRR RHHQDILQLG NSKADVLFDD LNFATSLLPG
201: ASDVLDMFTC NMLGTGASSS PYESYMPPIL PSPKQLRESG SLFPICSSNI KQEFHSPEPF QNPRSCSISP CDVGHHSPYG NQRPSDVMIS DSHAFTDGML
301: LTSKPLFGAV KLELPSFQYS ETSGFDQWKT TPSPPHSDPL DSVDAYIQSP PPLEIEKDES NCFSSCDTGL LDMLLPNAKI KTSAKRSLAL PEIPIPTQLS
401: AGENSPDSAG NVVKTEELDQ VWEPKRVDIT RPDVLLASSW LDQQGCFGIV RDSSNMSDAL ALLLGGEDIE NTYVTVGSSS SGQAQQGVES CTWTNMPPVW
501: SL
101: QMHAKMGNKW AQMAEHLPGR TDNEIKNYWN TRIKRRHRAG LPLYPPELHV EDLQWSEEYI TSNVTRVNRR RHHQDILQLG NSKADVLFDD LNFATSLLPG
201: ASDVLDMFTC NMLGTGASSS PYESYMPPIL PSPKQLRESG SLFPICSSNI KQEFHSPEPF QNPRSCSISP CDVGHHSPYG NQRPSDVMIS DSHAFTDGML
301: LTSKPLFGAV KLELPSFQYS ETSGFDQWKT TPSPPHSDPL DSVDAYIQSP PPLEIEKDES NCFSSCDTGL LDMLLPNAKI KTSAKRSLAL PEIPIPTQLS
401: AGENSPDSAG NVVKTEELDQ VWEPKRVDIT RPDVLLASSW LDQQGCFGIV RDSSNMSDAL ALLLGGEDIE NTYVTVGSSS SGQAQQGVES CTWTNMPPVW
501: SL
001: MSYTTATADS DDGMHSSIHN ESPAPDSISN GCRSRGKRSV LKKGPWTSTE DGILIDYVKK HGEGNWNAVQ KHTSLARCGK SCRLRWANHL RPNLKKGAFS
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
101: QEEEQLIVEM HAKMGNKWAQ MAEHLPGRTD NEIKNYWNTR IKRRQRAGLP LYPPEIYVDD LHWSEEYTKS NIIRVDRRRR HQDFLQLGNS KDNVLFDDLN
201: FAASLLPAAS DLSDLVACNM LGTGASSSRY ESYMPPILPS PKQIWESGSR FPMCSSNIKH EFQSPEHFQN TAVQKNPRSC SISPCDVDHH PYENQHSSHM
301: MMVPDSHTVT YGMHPTSKPL FGAVKLELPS FQYSETSAFD QWKTTPSPPH SDLLDSVDAY IQSPPPSQVE ESDCFSSCDT GLLDMLLHEA KIKTSAKHSL
401: LMSSPQKSFS STTCTTNVTQ NVPRGSENLI KSGEYEDSQK YLGRSEITSP SQLSAGGFSS AFAGNVVKTE ELDQVWEPKR VDITRPDVLL ASSWLDQGCY
501: GIVSDTSSMS DALALLGGDD IGNSYVTVGS SSGQAPRGVG SYGWTNMPPV WSL
Arabidopsis Description
ATMYB65Transcription factor [Source:UniProtKB/TrEMBL;Acc:A0A178VKX5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.