Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000531.1-P | Field mustard | nucleus | 95.14 | 94.48 |
| CDX83247 | Canola | nucleus | 95.14 | 94.48 |
| AT2G26960.1 | Thale cress | nucleus | 62.27 | 63.0 |
| CDX71481 | Canola | nucleus | 72.92 | 55.26 |
| CDY72198 | Canola | nucleus | 20.6 | 43.84 |
| CDY69320 | Canola | nucleus | 20.6 | 43.84 |
| AT2G26950.1 | Thale cress | cytosol | 32.87 | 37.17 |
| VIT_06s0009g02480.t01 | Wine grape | nucleus | 39.12 | 32.25 |
| PGSC0003DMT400015156 | Potato | nucleus | 34.95 | 30.08 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 22.92 | 29.82 |
| Solyc06g073640.2.1 | Tomato | nucleus | 34.72 | 29.76 |
| KRH18640 | Soybean | nucleus | 36.11 | 29.21 |
| CDY66700 | Canola | nucleus | 29.86 | 29.05 |
| Zm00001d033075_P001 | Maize | nucleus | 25.0 | 29.03 |
| KRG89766 | Soybean | nucleus | 34.26 | 28.41 |
| Zm00001d014364_P002 | Maize | nucleus | 26.16 | 28.11 |
| CDY68663 | Canola | nucleus | 29.63 | 28.01 |
| PGSC0003DMT400058426 | Potato | nucleus | 33.8 | 27.92 |
| EER90224 | Sorghum | nucleus | 27.31 | 27.57 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 18.06 | 27.56 |
| Solyc01g009070.2.1 | Tomato | nucleus | 34.03 | 27.37 |
| CDY19141 | Canola | nucleus | 27.78 | 27.03 |
| CDY15321 | Canola | nucleus | 28.01 | 27.01 |
| CDY20794 | Canola | nucleus | 25.69 | 27.01 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 24.77 | 26.75 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 26.16 | 26.53 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 24.54 | 26.5 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 24.54 | 26.5 |
| CDY19890 | Canola | nucleus | 26.16 | 26.34 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 25.93 | 26.23 |
| CDY64759 | Canola | nucleus | 18.52 | 26.23 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 23.61 | 26.15 |
| CDY48264 | Canola | nucleus | 28.94 | 26.1 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 25.46 | 26.07 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 24.07 | 26.07 |
| CDY67258 | Canola | nucleus | 25.93 | 26.05 |
| CDX67827 | Canola | nucleus | 18.29 | 25.99 |
| CDX71809 | Canola | nucleus | 16.2 | 25.74 |
| CDY41164 | Canola | nucleus | 16.2 | 25.74 |
| CDY12203 | Canola | nucleus | 28.47 | 25.57 |
| Os06t0679400-01 | Rice | nucleus | 26.39 | 25.5 |
| PGSC0003DMT400070549 | Potato | nucleus | 28.47 | 25.36 |
| CDY08526 | Canola | nucleus | 29.4 | 25.3 |
| CDY56849 | Canola | nucleus | 29.17 | 25.05 |
| CDY66041 | Canola | nucleus | 27.55 | 24.74 |
| KXG38121 | Sorghum | nucleus | 25.46 | 24.07 |
| Zm00001d013801_P001 | Maize | nucleus | 25.46 | 23.97 |
| CDY61426 | Canola | nucleus | 29.63 | 22.98 |
| CDY43016 | Canola | nucleus | 29.4 | 22.92 |
| Zm00001d036577_P001 | Maize | nucleus | 25.23 | 21.33 |
| Solyc11g072060.1.1 | Tomato | nucleus | 26.39 | 21.11 |
| Os03t0578900-00 | Rice | nucleus | 25.23 | 20.64 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HJC0 | UniProt:A0A078HJC0 | EnsemblPlants:CDY38535 | ProteinID:CDY38535 |
| ProteinID:CDY38535.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00066186001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF540 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EC1147 | SEG:seg |
Description
BnaC03g26620DBnaC03g26620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJC0]
Coordinates
chrLK032425:-:249761..251918
Molecular Weight (calculated)
48007.4 Da
IEP (calculated)
5.173
GRAVY (calculated)
-0.747
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVRHDSGS GDEFAIDKAF HKGPWTSAED QLLIAYVDKH GDGNWNAVQK HSGLSRCGKS CRLRWVNHLR PDLKKGSFTD KEEQRVIELH ASMGNKWARM
101: ATELPGRTDN EIKNFWNTRV KRLQRLGLPI YPDEVREQAM NAAAQNGHNA DSLDGHHSQE SLELDCLEIP ELNFKHLQLN GGSSFLQSML SSVPTGNQMR
201: QNPGLFQPNI YNVIASPYHQ PPNRKRFREP ETAFPYTGGY ATDEHSAQLW NSPFVESTPG QFNVAPDSHF LGNATTYSSP SEPLIHGAEK LELPSFQCFD
301: TQEEPGDWEA QHSNPMQAIE SDNTLVLSSP LTDPTPSECP SSFCDGLLES VVYGSSGEKQ TTTTDPDSPL LQSSLLGHID ITPATANTAG HNSSAETDLV
401: HFGPTFSNER RTSFEGGDWI RQLLGEDRDY TK
101: ATELPGRTDN EIKNFWNTRV KRLQRLGLPI YPDEVREQAM NAAAQNGHNA DSLDGHHSQE SLELDCLEIP ELNFKHLQLN GGSSFLQSML SSVPTGNQMR
201: QNPGLFQPNI YNVIASPYHQ PPNRKRFREP ETAFPYTGGY ATDEHSAQLW NSPFVESTPG QFNVAPDSHF LGNATTYSSP SEPLIHGAEK LELPSFQCFD
301: TQEEPGDWEA QHSNPMQAIE SDNTLVLSSP LTDPTPSECP SSFCDGLLES VVYGSSGEKQ TTTTDPDSPL LQSSLLGHID ITPATANTAG HNSSAETDLV
401: HFGPTFSNER RTSFEGGDWI RQLLGEDRDY TK
001: MGKVRQDSGS DDDNSIKKSF TKGPWTQAED NLLIAYVDKH GDGNWNAVQN NSGLSRCGKS CRLRWVNHLR PDLKKGAFTE KEEKRVIELH ALLGNKWARM
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
101: AEELPGRTDN EIKNFWNTRL KRLQRLGLPV YPDEVREHAM NAATHSGLNT DSLDGHHSQE YMEADTVEIP EVDFEHLPLN RSSSYYQSML RHVPPTNVFV
201: RQKPCFFQPP NVYNLIPPSP YMSTGKRPRE PETAFPCPGG YTMNEQSPRL WNYPFVENVS EQLPDSHLLG NAAYSSPPGP LVHGVENFEF PSFQYHEEPG
301: GWGADQPNPM PEHESDNTLV QSPLTAQTPS DCPSSSLYDG LLESVVYGSS GEKPATDTDS ESSLFQSFTP ANENITGKTC FLTLYALHAL HCLCNQFKKS
401: PLLHLHDKLN WCNKFRFNSF KSGTHIL
Arabidopsis Description
AtMYB81Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.