Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19890 | Canola | nucleus | 98.14 | 98.37 |
| CDY20794 | Canola | nucleus | 74.88 | 78.35 |
| Bra002938.1-P | Field mustard | nucleus | 99.3 | 74.26 |
| CDY61426 | Canola | nucleus | 80.7 | 62.3 |
| CDY43016 | Canola | nucleus | 79.07 | 61.37 |
| AT5G55020.1 | Thale cress | nucleus | 68.37 | 56.21 |
| CDY69320 | Canola | nucleus | 21.4 | 45.32 |
| CDY72198 | Canola | nucleus | 21.4 | 45.32 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 25.58 | 33.13 |
| Zm00001d033075_P001 | Maize | nucleus | 27.91 | 32.26 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 28.6 | 31.54 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 28.84 | 31.0 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 28.37 | 30.5 |
| CDY19141 | Canola | nucleus | 31.4 | 30.41 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 29.77 | 29.98 |
| CDY15321 | Canola | nucleus | 31.16 | 29.91 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 19.53 | 29.68 |
| CDY66700 | Canola | nucleus | 30.47 | 29.5 |
| KXG38121 | Sorghum | nucleus | 30.47 | 28.67 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 27.91 | 28.44 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 27.91 | 28.17 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 26.05 | 28.07 |
| CDY68663 | Canola | nucleus | 29.77 | 28.01 |
| Zm00001d014364_P002 | Maize | nucleus | 26.05 | 27.86 |
| Os06t0679400-01 | Rice | nucleus | 28.6 | 27.52 |
| Zm00001d013801_P001 | Maize | nucleus | 29.3 | 27.45 |
| EER90224 | Sorghum | nucleus | 27.21 | 27.34 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 25.35 | 27.25 |
| CDY12203 | Canola | nucleus | 30.0 | 26.82 |
| CDY48264 | Canola | nucleus | 29.77 | 26.72 |
| CDX83247 | Canola | nucleus | 26.51 | 26.21 |
| CDY41164 | Canola | nucleus | 16.51 | 26.1 |
| CDY38535 | Canola | nucleus | 26.05 | 25.93 |
| CDX71809 | Canola | nucleus | 16.05 | 25.37 |
| CDY08526 | Canola | nucleus | 29.3 | 25.1 |
| CDY56849 | Canola | nucleus | 29.3 | 25.05 |
| CDY66041 | Canola | nucleus | 27.91 | 24.95 |
| CDX67827 | Canola | nucleus | 16.98 | 24.01 |
| CDY64759 | Canola | nucleus | 16.98 | 23.93 |
| Os03t0578900-00 | Rice | nucleus | 26.98 | 21.97 |
| CDX71481 | Canola | nucleus | 28.84 | 21.75 |
| Zm00001d036577_P001 | Maize | nucleus | 25.12 | 21.14 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JI72 | UniProt:A0A078JI72 | EnsemblPlants:CDY67258 | ProteinID:CDY67258 |
| ProteinID:CDY67258.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00060517001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF475 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EECEA5 | SEG:seg |
Description
BnaAnng23930DBnaAnng23930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI72]
Coordinates
chrLK035908:+:6306..8257
Molecular Weight (calculated)
48451.4 Da
IEP (calculated)
6.323
GRAVY (calculated)
-0.960
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMYGGEIEK AGGSANHMSN GGGVVLKKGP WTAAEDEILS VYVRENGEGN WNAVQKNTGL ARCGKSCRLR WANHLRPNLR KGSFTGDEER LIIQLHAQLG
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLQ RQGLPLYPPD IIPNHQLHPH PHHHQQNHHH HQQHQHQQID SYTSFLTLPY SSPTAQTATY HNTNNNYPSF
201: SLNPSPSSYP TTTSSPSFLH SQYTPNYSST TFHNNPVYSM KQEFPSNQIP QIGVFNNVNN FTDNEKQNNT NLHRRSISCS LLEDVLEEAE ALAGGDGDRP
301: SKRRQLTASP PNHHNNNNND NDNFFSVSFE QYDSSENICS LQDLKPKEEE SLQMNTMQDD IAKLLDWGSD SGEISNGQSS VLTDDNLVLD VHQLNSLFPS
401: DSTAAETTTN DEQNNNDKIN CSWDNLHGVS
101: NKWARMAAQL PGRTDNEIKN YWNTRLKRLQ RQGLPLYPPD IIPNHQLHPH PHHHQQNHHH HQQHQHQQID SYTSFLTLPY SSPTAQTATY HNTNNNYPSF
201: SLNPSPSSYP TTTSSPSFLH SQYTPNYSST TFHNNPVYSM KQEFPSNQIP QIGVFNNVNN FTDNEKQNNT NLHRRSISCS LLEDVLEEAE ALAGGDGDRP
301: SKRRQLTASP PNHHNNNNND NDNFFSVSFE QYDSSENICS LQDLKPKEEE SLQMNTMQDD IAKLLDWGSD SGEISNGQSS VLTDDNLVLD VHQLNSLFPS
401: DSTAAETTTN DEQNNNDKIN CSWDNLHGVS
001: MIVYGGGASE DGEGGGVVLK KGPWTVAEDE TLAAYVREYG EGNWNSVQKK TWLARCGKSC RLRWANHLRP NLRKGSFTPE EERLIIQLHS QLGNKWARMA
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
101: AQLPGRTDNE IKNYWNTRLK RFQRQGLPLY PPEYSQNNHQ QQMYPQQPSS PLPSQTPASS FTFPLLQPPS LCPKRCYNTA FSPKASYISS PTNFLVSSPT
201: FLHTHSSLSS YQSTNPVYSM KHELSSNQIP YSASLGVYQV SKFSDNGDCN QNLNTGLHTN TCQLLEDLME EAEALADSFR APKRRQIMAA LEDNNNNNNF
301: FSGGFGHRVS SNSLCSLQGL TPKEDESLQM NTMQDEDITK LLDWGSESEE ISNGQSSVIT TENNLVLDDH QFAFLFPVDD DTNNLPGIC
Arabidopsis Description
MYB97Transcription factor MYB97 [Source:UniProtKB/Swiss-Prot;Acc:Q9S773]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.