CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68663	Canola	nucleus	95.5	92.78
AT2G32460.1	Thale cress	nucleus	78.83	71.43
CDY19141	Canola	nucleus	57.88	57.88
CDY15321	Canola	nucleus	58.33	57.81
CDY12203	Canola	nucleus	58.56	54.05
CDY48264	Canola	nucleus	57.66	53.44
CDY72198	Canola	nucleus	21.85	47.78
CDY69320	Canola	nucleus	21.62	47.29
HORVU7Hr1G105450.1	Barley	nucleus	24.77	33.13
PGSC0003DMT400036086	Potato	nucleus	33.11	30.88
CDY67258	Canola	nucleus	29.5	30.47
CDY19890	Canola	nucleus	29.28	30.3
CDY20794	Canola	nucleus	27.93	30.17
VIT_12s0059g00700.t01	Wine grape	nucleus	28.83	30.05
CDX83247	Canola	nucleus	29.28	29.89
CDY38535	Canola	nucleus	29.05	29.86
Zm00001d033075_P001	Maize	nucleus	25.0	29.84
PGSC0003DMT400074486	Potato	nucleus	31.98	29.34
Solyc07g052300.2.1	Tomato	nucleus	31.98	29.22
KRH26778	Soybean	nucleus	30.86	28.72
Zm00001d014364_P002	Maize	nucleus	25.9	28.61
HORVU7Hr1G105520.2	Barley	nucleus	25.0	28.46
KRH22574	Soybean	nucleus	30.41	28.18
TraesCS6D01G126900.1	Wheat	nucleus	25.0	27.82
HORVU6Hr1G026450.1	Barley	nucleus	25.0	27.75
TraesCS7D01G446700.1	Wheat	nucleus	25.0	27.75
TraesCS4A01G467100.1	Wheat	nucleus	17.57	27.56
TraesCS7B01G357900.1	Wheat	nucleus	24.77	27.5
CDY66041	Canola	nucleus	29.5	27.23
EER90224	Sorghum	nucleus	26.13	27.1
CDY56849	Canola	nucleus	29.95	26.44
CDY61426	Canola	nucleus	33.11	26.39
CDY08526	Canola	nucleus	29.73	26.29
HORVU7Hr1G027370.1	Barley	nucleus	25.23	26.23
Os06t0679400-01	Rice	nucleus	26.35	26.17
CDY43016	Canola	nucleus	32.66	26.17
TraesCS7B01G031000.1	Wheat	nucleus	24.77	26.07
TraesCS7D01G130100.1	Wheat	nucleus	25.0	26.06
Solyc12g005890.1.1	Tomato	nucleus	22.52	24.69
KXG38121	Sorghum	nucleus	25.0	24.29
Zm00001d013801_P001	Maize	nucleus	25.0	24.18
CDY41164	Canola	nucleus	14.64	23.9
CDX71809	Canola	nucleus	14.41	23.53
CDY64759	Canola	nucleus	15.99	23.28
CDX67827	Canola	nucleus	15.54	22.7
CDX71481	Canola	nucleus	27.93	21.75
Os03t0578900-00	Rice	nucleus	24.77	20.83
Zm00001d036577_P001	Maize	nucleus	22.75	19.77

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	GO:A0A078JJT3	UniProt:A0A078JJT3	EnsemblPlants:CDY66700	ProteinID:CDY66700
ProteinID:CDY66700.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	EnsemblPlantsGene:GSBRNA2T00055597001
InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF918	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0004EB84F4	SEG:seg

Description

BnaCnng51960DBnaCnng51960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJT3]

Coordinates

chrLK035416:-:12127..13903

Molecular Weight (calculated)

49985.3 Da

IEP (calculated)

6.462

GRAVY (calculated)

-0.760

Length

444 amino acids

Sequence
(BLAST)

001: MHGGGETTAT ATEARGLKKG PWTTKEDAIL TEYVRKHGEG NWNAVQKNSG LLRCGKSCRL RWANHLRPNL KKGSFSPDEE KIIIELHAKM GNKWARMASQ
101: LPGRTDNEIK NYWNTRMKRR QRAGLPLYPH EIHHQGIDND DEFEFNSFQF SNQDHSNHQN MIQYTNSSNI PSPSSSFSSS SSQPQKNMCL DPLIYTNPGL
201: DHIPATPMNT HMFSLYNNSL ENENNQFGFS LPLSSSSPSN EFCTINKKDI DAKSCSSLLM RDHEMRPSSF PLGLDNTVLE LPSVQIPTHF RSYNTIIDNG
301: VHLYPPAGNS GLLDTVLEES RALSRGGIFK DVTVSSSSLC EDQDKRVEID FENRLIDHLN SSHQSSSETT PNLYKRYNEP TIVKTTMDDD DGILLSFINN
401: FPSTTPLPDD WYRVTEIQTE ALTSGILIGN HQGNSRLEPQ KAPP

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.