Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g005890.1.1 | Tomato | nucleus | 80.25 | 94.32 |
| Bra021791.1-P | Field mustard | nucleus | 29.62 | 36.34 |
| PGSC0003DMT400074486 | Potato | nucleus | 35.5 | 34.92 |
| CDY15321 | Canola | nucleus | 32.56 | 34.6 |
| CDY19141 | Canola | nucleus | 31.93 | 34.23 |
| HORVU7Hr1G105450.1 | Barley | nucleus | 23.53 | 33.73 |
| Zm00001d033075_P001 | Maize | nucleus | 26.05 | 33.33 |
| CDY66700 | Canola | nucleus | 30.88 | 33.11 |
| CDY68663 | Canola | nucleus | 31.72 | 33.04 |
| Bra022888.1-P | Field mustard | nucleus | 31.09 | 32.39 |
| VIT_12s0059g00700.t01 | Wine grape | nucleus | 28.36 | 31.69 |
| Zm00001d014364_P002 | Maize | nucleus | 26.68 | 31.59 |
| CDY48264 | Canola | nucleus | 31.72 | 31.52 |
| CDY12203 | Canola | nucleus | 31.72 | 31.39 |
| Bra005597.1-P | Field mustard | nucleus | 31.51 | 31.32 |
| TraesCS7B01G357900.1 | Wheat | nucleus | 26.26 | 31.25 |
| HORVU7Hr1G105520.2 | Barley | nucleus | 25.42 | 31.03 |
| HORVU7Hr1G027370.1 | Barley | nucleus | 27.73 | 30.91 |
| AT2G32460.1 | Thale cress | nucleus | 31.72 | 30.82 |
| TraesCS7D01G446700.1 | Wheat | nucleus | 25.84 | 30.75 |
| PGSC0003DMT400015156 | Potato | nucleus | 32.35 | 30.68 |
| TraesCS7D01G130100.1 | Wheat | nucleus | 27.1 | 30.28 |
| KRH22574 | Soybean | nucleus | 30.46 | 30.27 |
| KRH26778 | Soybean | nucleus | 30.25 | 30.19 |
| EER90224 | Sorghum | nucleus | 26.89 | 29.91 |
| TraesCS7B01G031000.1 | Wheat | nucleus | 26.47 | 29.86 |
| TraesCS6D01G126900.1 | Wheat | nucleus | 25.0 | 29.82 |
| Os06t0679400-01 | Rice | nucleus | 27.73 | 29.53 |
| HORVU6Hr1G026450.1 | Barley | nucleus | 24.58 | 29.25 |
| KXG38121 | Sorghum | nucleus | 27.73 | 28.88 |
| Zm00001d013801_P001 | Maize | nucleus | 27.73 | 28.76 |
| TraesCS4A01G467100.1 | Wheat | nucleus | 17.02 | 28.62 |
| PGSC0003DMT400058426 | Potato | nucleus | 31.3 | 28.49 |
| PGSC0003DMT400066066 | Potato | nucleus | 16.18 | 25.16 |
| PGSC0003DMT400070549 | Potato | nucleus | 24.79 | 24.33 |
| Zm00001d036577_P001 | Maize | nucleus | 24.79 | 23.09 |
| Os03t0578900-00 | Rice | nucleus | 25.42 | 22.92 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:102588590 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M1B395 | InterPro:Myb_dom | PFAM:PF00249 |
| EnsemblPlantsGene:PGSC0003DMG400013897 | PGSC:PGSC0003DMG400013897 | EnsemblPlants:PGSC0003DMT400036086 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF475 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002948A48 | RefSeq:XP_006352041.1 | SEG:seg |
Description
Protein 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400013897]
Coordinates
chr12:+:6500640..6504467
Molecular Weight (calculated)
53071.4 Da
IEP (calculated)
6.925
GRAVY (calculated)
-0.887
Length
476 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSGGGVNK NNGTSISRNH NGGGGGLGAR QLKKGPWTTT EDAILMEYVK KHGEGNWNAV QRNSGLMRCG KSCRLRWANH LRPHLKKGAF SLEEERLIVE
101: LHAKLGNKWA RMAAQLPGRT DNEIKNYWNT RLKRRQRAGL PIYPQDIQPQ NYQQDQNQQQ HSTNNIPSPF DNHQNSNYNN NSPLSLLDIF NPSTMKPSRN
201: IIPHQYQFNN NPSSPFLTNT NNINNQVKFF RDPRVSLSLT LASSMKNSQL SSMVAPVPNN FSQGYSSSMP VPPLQHTYPN FTTTTRPYTA ISSNPNGLIL
301: GMGIEHRSVQ SSVPRNTSTL SDHADNNYAV NHGLSRGNSG LLEDLLEESH TLTRGEKIEE NCPINENEDN NKGKLIWEEY GLTEEAADAI LTEESTYNFA
401: HKHSEDSSSP NSSSGITTKE ASLENMGNQV DDDIMRFLDN FPLGVPVPDW CDDQQNTSNG QSFECDQIQL SSKSSS
101: LHAKLGNKWA RMAAQLPGRT DNEIKNYWNT RLKRRQRAGL PIYPQDIQPQ NYQQDQNQQQ HSTNNIPSPF DNHQNSNYNN NSPLSLLDIF NPSTMKPSRN
201: IIPHQYQFNN NPSSPFLTNT NNINNQVKFF RDPRVSLSLT LASSMKNSQL SSMVAPVPNN FSQGYSSSMP VPPLQHTYPN FTTTTRPYTA ISSNPNGLIL
301: GMGIEHRSVQ SSVPRNTSTL SDHADNNYAV NHGLSRGNSG LLEDLLEESH TLTRGEKIEE NCPINENEDN NKGKLIWEEY GLTEEAADAI LTEESTYNFA
401: HKHSEDSSSP NSSSGITTKE ASLENMGNQV DDDIMRFLDN FPLGVPVPDW CDDQQNTSNG QSFECDQIQL SSKSSS
001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC
Arabidopsis Description
MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.