CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26778	Soybean	nucleus	90.4	90.78
Bra021791.1-P	Field mustard	nucleus	27.56	34.02
CDY19141	Canola	nucleus	31.11	33.56
CDY15321	Canola	nucleus	31.32	33.48
HORVU7Hr1G105450.1	Barley	nucleus	22.55	32.53
AT2G32460.1	Thale cress	nucleus	32.78	32.04
PGSC0003DMT400074486	Potato	nucleus	32.15	31.82
Solyc07g052300.2.1	Tomato	nucleus	31.73	31.28
Bra005597.1-P	Field mustard	nucleus	30.48	30.48
CDY48264	Canola	nucleus	30.48	30.48
PGSC0003DMT400036086	Potato	nucleus	30.27	30.46
CDY66700	Canola	nucleus	28.18	30.41
CDY12203	Canola	nucleus	30.48	30.35
VIT_12s0059g00700.t01	Wine grape	nucleus	26.93	30.28
CDY68663	Canola	nucleus	28.18	29.54
KRH46196	Soybean	nucleus	22.55	29.43
TraesCS4A01G467100.1	Wheat	nucleus	17.33	29.33
Bra022888.1-P	Field mustard	nucleus	27.97	29.32
Zm00001d033075_P001	Maize	nucleus	22.76	29.3
HORVU7Hr1G027370.1	Barley	nucleus	26.1	29.27
KRH14648	Soybean	extracellular, golgi	20.67	29.12
HORVU7Hr1G105520.2	Barley	nucleus	23.59	28.97
KRH13249	Soybean	nucleus	32.15	28.89
KRH20589	Soybean	nucleus	31.94	28.71
TraesCS7B01G031000.1	Wheat	nucleus	25.26	28.67
TraesCS7D01G130100.1	Wheat	nucleus	25.26	28.4
TraesCS6D01G126900.1	Wheat	nucleus	23.59	28.32
TraesCS7D01G446700.1	Wheat	nucleus	23.59	28.25
KRH62709	Soybean	nucleus	29.85	28.04
TraesCS7B01G357900.1	Wheat	nucleus	23.38	28.0
KRH46191	Soybean	nucleus	26.72	27.77
HORVU6Hr1G026450.1	Barley	nucleus	23.17	27.75
Zm00001d014364_P002	Maize	nucleus	23.17	27.61
KRH56248	Soybean	nucleus	29.44	27.43
KRH46194	Soybean	nucleus	26.1	27.35
KRH48761	Soybean	nucleus	17.54	27.1
Zm00001d013801_P001	Maize	nucleus	25.89	27.02
KXG38121	Sorghum	nucleus	25.68	26.91
KRG98748	Soybean	nucleus	29.44	26.65
EER90224	Sorghum	nucleus	23.59	26.4
KRH66578	Soybean	nucleus	16.7	25.72
Os06t0679400-01	Rice	nucleus	23.8	25.5
KRG89766	Soybean	nucleus	27.35	25.14
KRH18640	Soybean	nucleus	27.97	25.09
KRH36402	Soybean	nucleus	15.87	24.84
Solyc12g005890.1.1	Tomato	nucleus	20.67	24.44
KRH27535	Soybean	nucleus	15.24	24.25
Zm00001d036577_P001	Maize	nucleus	22.76	21.33
Os03t0578900-00	Rice	nucleus	22.34	20.27

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EMBL:ACUP02008422	EnsemblPlantsGene:GLYMA_13G309200	GO:GO:0000981	GO:GO:0001135
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	UniProt:K7M2W6	EnsemblPlants:KRH22574	ProteinID:KRH22574	ProteinID:KRH22574.1
InterPro:Myb_dom	PFAM:PF00249	PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF938	InterPro:SANT/Myb
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI000233C05C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:-:40482889..40486840

Molecular Weight (calculated)

53072.3 Da

IEP (calculated)

6.166

GRAVY (calculated)

-0.928

Length

479 amino acids

Sequence
(BLAST)

001: MARTVSNNDD ETAAKEEGEV KDGVRKGPWT PEEDAILMEY VKKHGEGNWN SVQKNSGLLR CGKSCRLRWA NHLRPNLKKG AFSPEEEQVI IDLHSKLGNK
101: WARMAAQLPG RTDNEIKNFW NTRMKRRQRA GLPIYPPEVH AEANAYHLQH HRYLEQQQPP PYSSSSFSLL LSSCYPKKLN DPNQIHHHSS ANPMQNQPDH
201: SADRSINPSQ QFKFSNENST GNNGNFAFPM SPLSPYGSSS STLLNHSFGG DHGGFIAGSP YEQPFPLVQG STTDISSNQT PTPASSYASG VDGLMGASSM
301: VNNNNNNNDY YEVAPLSPHQ GNSGLLDALV MEAQGLYHNE KSRSEEDLNL AGKLSCKRKN MEYAEEGGTV PAGVSAMKKN SGNSSNESQR DDDISSSQLS
401: KGKKQIGEDP LEEMNGMDDD LVSLLNQFPL EMPMPEWYRR GENQSLGLEN QPKASSPDPA DHEHAWTLGT CWNNMPRIC

Best Arabidopsis Sequence Match ( AT2G32460.1 )
(BLAST)

001: MDGGGETTAT ATMEGRGLKK GPWTTTEDAI LTEYVRKHGE GNWNAVQKNS GLLRCGKSCR LRWANHLRPN LKKGSFTPDE EKIIIDLHAK LGNKWARMAS
101: QLPGRTDNEI KNYWNTRMKR RQRAGLPLYP HEIQHQGIDI DDEFEFDLTS FQFQNQDLDH NHQNMIQYTN SSNTSSSSSS FSSSSSQPSK RLRPDPLVST
201: NPGLNPIPDS SMDFQMFSLY NNSLENDNNQ FGFSVPLSSS SSSNEVCNPN HILEYISENS DTRNTNKKDI DAMSYSSLLM GDLEIRSSSF PLGLDNSVLE
301: LPSNQRPTHS FSSSPIIDNG VHLEPPSGNS GLLDALLEES QALSRGGLFK DVRVSSSDLC EVQDKRVKMD FENLLIDHLN SSNHSSLGAN PNIHNKYNEP
401: TMVKVTVDDD DELLTSLLNN FPSTTTPLPD WYRVTEMQNE ASYLAPPSGI LMGNHQGNGR VEPPTVPPSS SVDPMASLGS CYWSNMPSIC

Arabidopsis Description

MYB101Transcription factor MYB101 [Source:UniProtKB/Swiss-Prot;Acc:O80883]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.